Conserved Protein Domain Family
BimA_second

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NF040983: BimA_second 
trimeric autotransporter actin-nucleating factor BimA
This HMM describes BimA (Burkholderia intracellular motility A), WP_004266405.1-like proteins in Burkholderia mallei or B. pseudomallei. The term BimA has also been used for WP_011205626.1-like homologs that have a very different N-terminal half.
Statistics
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PSSM-Id: 468913
Aligned: 6 rows
Threshold Bit Score: 565.683
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_063926087   1 MVLYIRMKYHRFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIEQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ps...
WP_208808047   1 MVLYIRMKYHRFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIEQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ps...
WP_080315214   1 MVLYIRMKYHRFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIEQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ps...
WP_063923557   1 MVLYIRMKYHHFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIEQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ps...
WP_081244576   1 MVLYIRMKYHRFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIGQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ma...
WP_004206318   1 MVLYIRMKYHRFPRSHAQQDTGRAASTVPFQRFAHLLCSSIAPLALGFSTDALAIGQAESTAFNAVIDQIKKGDFKLKPV 80  Burkholderia ma...
WP_063926087  81 GDRTLPNKVPPPPPPPPPP-PPSTTTPPPPPPPPPPPpSTTPPPPPPPSTTPSPPPPTTTPPTRTTPSTTTPTPSMHPIQ 159 Burkholderia ps...
WP_208808047  81 GDRTLPNKVPPPPPPPPPP-PPPPSTTTPPPPPPPPP-STTPPPPPPPSTTPSPPPPTTTPPTRTTPSTTTPTPSMHPIQ 158 Burkholderia ps...
WP_080315214  81 GDRTLPNKVPPPPSTTTPPpPPPPSTTPPPPPP--------PPPPPPPSTTPSPPPPTTTPPTRTTPSTTTPTPSMHPIQ 152 Burkholderia ps...
WP_063923557  81 GDRTLPNKVPPPPPP-----PPSTTTPPPPPPPPPPP---STTPSPPPSPPPPPPTTTTTPPTRTTPSTTTPTPSMHPIQ 152 Burkholderia ps...
WP_081244576  81 GDRTLPNKVPPPPPPPPPP-PPPPPPs------PPPPsPPPPSPPPPSPPPPSPPPPTTTPPTTTPPTTTTPTPSMHPIQ 153 Burkholderia ma...
WP_004206318  81 GDRTLPNKVPPPPPPPPPP-PPPSPP-------PPSPpPPSPPPPPPPPPPPSPPPPSPPPPTTTPPTTTTPTPSMHPIQ 152 Burkholderia ma...
WP_063926087 160 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 239 Burkholderia ps...
WP_208808047 159 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 238 Burkholderia ps...
WP_080315214 153 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 232 Burkholderia ps...
WP_063923557 153 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 232 Burkholderia ps...
WP_081244576 154 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 233 Burkholderia ma...
WP_004206318 153 PTQLPSIPNATPTSGSATNVTINFNSTGASAMGTNSIALDFHARAKDSDSLASGRLAHASGPRSTAIGAEANASGQNTVA 232 Burkholderia ma...
WP_063926087 240 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 319 Burkholderia ps...
WP_208808047 239 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 318 Burkholderia ps...
WP_080315214 233 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 312 Burkholderia ps...
WP_063923557 233 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 312 Burkholderia ps...
WP_081244576 234 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 313 Burkholderia ma...
WP_004206318 233 LGAGSIADRNNTVSVGRHGDERQIVHVAAGTQATDAVNVGQLNLAMSNANAYTNQRIGDLQQSITDTARDAYSGVAAATA 312 Burkholderia ma...
WP_063926087 320 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 382 Burkholderia pseudomallei
WP_208808047 319 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 381 Burkholderia pseudomallei
WP_080315214 313 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 375 Burkholderia pseudomallei
WP_063923557 313 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 375 Burkholderia pseudomallei
WP_081244576 314 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 376 Burkholderia mallei
WP_004206318 313 LTMIPDVDRDKRVSIGVGGAVYKGHRAVALGGTARINENLKVRAGVAMSAGGNAVGIGMSWQW 375 Burkholderia mallei
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