1EF1,3U8Z,2YVC,2D2Q,1J19,2EMT,1GC6,2ZPY,1SGH


Conserved Protein Domain Family
FERM_C_ERM

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cd13194: FERM_C_ERM 
Click on image for an interactive view with Cn3D
FERM domain C-lobe/F3 of the ERM family
The ERM family includes ezrin, radixin, moesin and merlin. They are composed of a N-terminal FERM (ERM) domain (also called N-ERMAD (N-terminal ERM association domain)), a coiled coil region (CRR), and a C-terminal domain CERMAD (C-terminal ERM association domain) which has an F-actin-binding site (ABD). Two actin-binding sites have been identified in the middle and N-terminal domains. Merlin is structurally similar to the ERM proteins, but instead of an actin-binding domain (ABD), it contains a C-terminal domain (CTD), just like the proteins from the 4.1 family. Activated ezrin, radixin and moesin are thought to be involved in the linking of actin filaments to CD43, CD44, ICAM1-3 cell adhesion molecules, various membrane channels and receptors, such as the Na+/H+ exchanger-3 (NHE3), cystic fibrosis transmembrane conductance regulator (CFTR), and the beta2-adrenergic receptor. The ERM proteins exist in two states, a dormant state in which the FERM domain binds to its own C-terminal tail and thereby precludes binding of some partner proteins, and an activated state, in which the FERM domain binds to one of many membrane binding proteins and the C-terminal tail binds to F-actin. The FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain of ERM is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270015
Aligned: 37 rows
Threshold Bit Score: 155.124
Created: 6-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphoinositide binding site [chemical binding site]
Evidence:
  • Structure:1GC6; Mouse Radixin FERM F3 binds inositol-(1,4, 5)-trisphosphate (IP3), contacts at 4A
  • Comment:These residues differ from PIP2 binding sites identified by in vitro studies

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1EF1_A       197 XYGVNYFSIKNkkGSELWLGVDALGLNIYEqnDRLTPKIGFPWSEIRNISFNDKKFVIKPIDk----------------- 259 human
1GC6_A       200 MYGVNYFEIKNkkGTELWLGVDALGLNIYEhdDKLTPKIGFPWSEIRNISFNDKKFVIKPIDk----------------- 262 house mouse
NP_498336    210 MYGILYYPICNnkETDLHLGISAQGLGIYKgvNRITPRPFFSWSEIKNIQFKNRKFHMKTVD------------------ 271 nematode
BAF49216     206 MFGVSLFKIKNnkGSELCLGINAVSVNVYEpdNQLLPIVSFQWSELADMSFSDNKFVIKQSSlptirsgtlrrgatmses 285 Molgula tectifo...
XP_002125990 214 MSGVQYFKIKDgnGADLWLGIDAKSVSMYPynDQLHPTKSYQWSELADMSYYGNKFVIKQTTrpnntntigrrfn-lgas 292 Ciona intestinalis
XP_001742147 225 QFAMLRYDIKNknGTPLVLGVSPRGLYVFRlnNMQKPVVTFSWAECSELAFADKKFTICVHDk----------------- 287 Monosiga brevic...
ACU32629     318 MYGVNYFPITNknKTKLWLGVTSVGLNIYDerDKLTPKTTFQWNEIRHVSFDDKKFTIRLVDa----------------- 380 fruit fly
AFJ24852     145 MFGVNYFNIKNkkGSELLLGVDALGLSIYKqdNKLTPTIGFPWSEIKNVSYSNKKFTIKSSDk----------------- 207 Schmidtea medit...
EGD75505     205 MYGVNYFPIKNkrGTLLWLGVDALGLNIYKsnDKLTPSISFPWSEIKTVSYNDRKFVIKPLDk----------------- 267 Salpingoeca sp....
XP_967318    192 MYGVTFFKIKNrkGTDVLLGVNALGLDIYKpeDKLNPQISFPWAEIKNLKFKDRKFVIKPTDk----------------- 254 red flour beetle
Feature 1                              #   #              
1EF1_A       260 -------kAPDFVFYAPRLRINKRILALCXGNHELYXRRRK 293 human
1GC6_A       263 -------kAPDFVFYAPRLRINKRILALCMGNHELYMRRRK 296 house mouse
NP_498336    272 --------KSTISFRSRETSIDSSILDLCIGTHNLYLRRRQ 304 nematode
BAF49216     286 senselqqNKDFVFFTDEPGVNKIILDLCRGNHDLFMKRRK 326 Molgula tectiformis
XP_002125990 293 tsnlnvnaPEDIVFLVDDPEVNKLILDLCRGNHDLFMQRRR 333 Ciona intestinalis
XP_001742147 288 -------aTKDFSVFFNRAKTCQRILDMCVGYHSLYVQTVH 321 Monosiga brevicollis MX1
ACU32629     381 -------kVSNFIFYSQDLHINKMILDLCKGNHDLYMRRRK 414 fruit fly
AFJ24852     208 -------nSSNFVFFTDHSRINKTILHMSMGNHDLYLKRRK 241 Schmidtea mediterranea
EGD75505     268 -------hAVDLVFFSTDPSVNKTILQLCIGNHELYLKRRE 301 Salpingoeca sp. ATCC50818
XP_967318    255 -------tSQDFVFFTSEPRMSKMILNLGIGNHSLYVKRRK 288 red flour beetle

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