Conserved Protein Domain Family
RhoGAP_ARHGAP6

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cd04376: RhoGAP_ARHGAP6 
RhoGAP_ARHGAP6: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP6-like proteins. ArhGAP6 shows GAP activity towards RhoA, but not towards Cdc42 and Rac1. ArhGAP6 is often deleted in microphthalmia with linear skin defects syndrome (MLS); MLS is a severe X-linked developmental disorder. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239841
Aligned: 7 rows
Threshold Bit Score: 312.453
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       #                                         #   #
NP_038286  402 SLNPIyr--qvPRLVDSCCQHLEkhGLQTVGIFRVGSSKKRVRQLREEFDrgidvs-----leeehsVHDVAALLKEFLR 474  human
AAB52434   520 DVDPHal--qvPKIVENCTQYLMtyGLTQVGLFRVAGNTKRCRQLRNALEkvgggavindnmventtSHDVATLLKEYFR 597  nematode
XP_968130   37 SDLPHeeeasvPNILSECFRHLEqhGLHTLGIFRVSTSKKRIRQLREDFDcgkets-----ldddqcPHDVATLLKEYLR 111  red flour beetle
XP_416840  267 SLNPIyr--qvPRLVDSCCQHLEkhGLQTVGIFRVGSSKKRVRQLREEFDrgidvv-----ldeehsIHDVAALLKEFLR 339  chicken
BAC87322   227 SLNPIak--qiPQVVEACCQFIEkhGLSAVGIFTLEYSVQRVRQLREEFDqgldvv-----lddnqnVHDVAALLKEFFR 299  human
AAI17648   206 SLNPIyr--qvPRVVERCCNHIQtyGLQTLGIFRVGSSKKRVRQLREDFDngidvv-----ldeehsVHDVAALLKEFLR 278  zebrafish
XP_787163  556 SLAPLep--qvPRLVSQCFRHLEkhGVQVIGIFRVGGSKKRIRQLREELDvgdliq-----lsssisPHDVGALLKEYFR 628  purple urchin
Feature 1                                                                                      
NP_038286  475 DMPDPLLTrELYTAFINTllle--peeQLGTLQLLIYlLPPCNCDTLHRLLQFLSIVARHaddniskDGQEVTGNKMTSL 552  human
AAB52434   598 DLPQSLLPgEHYSAYIGAakln--vdeRIEAIRLLFAlLVSPILDTLFVLLKFLHEVSCHsqdrhdeDGELLSGNKMDAR 675  nematode
XP_968130  112 DLPDPLLCrDLYQAFVQTqs-----klQFEALQHLIQlLPTANRDTLYALLGFLATVAQNaadtkdeSGECVSGNKMDSN 186  red flour beetle
XP_416840  340 DMPDPLLTrELYTPFINTllle--pdeQLSTLQLLIYlLPPCNCDTLHRLLQFLSTVAGHaedttdkDGQEVTGNKMTSL 417  chicken
BAC87322   300 DMKDSLLPdDLYMSFLLTatlk--pqdQLSALQLLVYlMPPCHSDTLERLLKALHKITENcedsigiDGQLVPGNRMTST 377  human
AAI17648   279 DMPDPLLPrELYRAFLHAnllr--gadQLSYLQQLLYlLPPCNCDTLLRLLTLLHTVQENansstgpNKQEISGNKMTAA 356  zebrafish
XP_787163  629 DLPEPLLTrELYTAFVGTaklsnsleqQKEALRLLVYlLPIAHRDTLRALLSFLRTVAAHsadvidaDGHEQQGNKMDSI 708  purple urchin
Feature 1      #  ##                              #                    
NP_038286  553 NLATIFGPNLLhkqkssdkefsvqssaraeeSTAIIAVVQKMIENYEALFMVPPDL 608  human
AAB52434   676 NLATIFAPSILrvdhdkl-------hetlaeNEHQVIIVETMISNVEEIFKIPKEL 724  nematode
XP_968130  187 NLATVFAPNILhcikpgssk--eiasdrpedRIDIINVVRTLIDHYKQLYTISAEL 240  red flour beetle
XP_416840  418 NLATIFGPNLLhkqkstdkeftvqssaraeeSTAIIAVVQKMIENYEALFMVSPDL 473  chicken
BAC87322   378 NLALVFGSALLkkgkfgkres-rktklgidhYVASVNVVRAMIDNWDVLFQVPPHI 432  human
AAI17648   357 NLAVIFGPNLLqkergserel-spqalgiedSTAVISVTLMLIQNHQHLFMVSAEL 411  zebrafish
XP_787163  709 NLATLFGPNILrrtksgelk--gdaadhmeeNRDVIQVVQRLIDHHDEMFMVSGEM 762  purple urchin

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