Conserved Protein Domain Family
HNHc_6
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pfam16784: HNHc_6 
Putative HNHc nuclease
This family is found in Gammaproteobacteria. It may be an HNH-like nucleases. The shorter matches are likely to be from phage proteins whereas the longer members are probably from the bacterial genomes.
Links
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Statistics
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PSSM-Id: 293389
Aligned: 2 rows
Threshold Bit Score: 352.37
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q2FUP5  21 GVEleQSHIDLLENGYPLKAEVEVPDNKKLSIEQRKKIFAMCRDIELHWGE-PVESTRKLLQTELEIMKGYEE-ISLRDC 98  Staphylococcus aureus...
Q03RB7  21 DVD--PPTRRIIAGNVGQLAEIKFDDGRHITIDQRKKIFALLGEIDQWTGNfTMDITERQMKQLFISEKGLDEeFSFSDC 98  Lactobacillus brevis ...

Q2FUP5  99 SMKVARELIELIIAFMFHHQIPMSVETSKLLSEDKALLYWATINRNCVICgKPHADLAH-YEaVGRGMNRNKMNHYDKHV 177 Staphylococcus aureus...
Q03RB7  99 SLKLASEFIEFLIGTCFEYDIPFAGKTLDAIREQYGWDMFCIKYHRCMIC-NQPADIAHvHA-VGIGRDRNHISHIGNYV 176 Lactobacillus brevis ...

Q2FUP5 178 LALCRQHHNEQHAIGVKSFDDKYHLHDswIKVDERLNKMLKGE 220 Staphylococcus aureus subsp. aureus NCTC 8325
Q03RB7 177 MALCRRHHQEQHRVGIKSFMKENQLKG--VKVTPEIAKMLKLG 217 Lactobacillus brevis ATCC 367
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