2VPW


Conserved Protein Domain Family
PsrB

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cd10551: PsrB 
Click on image for an interactive view with Cn3D
polysulfide reductase beta (PsrB) subunit
This family includes the beta subunit of bacterial polysulfide reductase (PsrABC), an integral membrane-bound enzyme responsible for quinone-coupled reduction of polysulfides, a process important in extreme environments such as deep-sea vents and hot springs. Polysulfide reductase contains three subunits: a catalytic subunit PsrA, an electron transfer PsrB subunit and the hydrophobic transmembrane PsrC subunit. PsrB belongs to the DMSO reductase superfamily that contains [4Fe-4S] clusters which transfer the electrons from the A subunit to the hydrophobic integral membrane C subunit via the B subunit. In Shewanella oneidensis, which has highly diverse anaerobic respiratory pathways, PsrABC is responsible for H2S generation as well as its regulation via respiration of sulfur species. PsrB transfers electrons from PsrC (serving as quinol oxidase) to the catalytic subunit PsrA for reduction of corresponding electron acceptors. It has been shown that T. thermophilus polysulfide reductase could be a key energy-conserving enzyme of the respiratory chain, using polysulfide as the terminal electron acceptor and pumping protons across the membrane.
Statistics
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PSSM-Id: 319873
Aligned: 274 rows
Threshold Bit Score: 180.036
Created: 10-Feb-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Fe-S clustertrimer
Conserved site includes 49 residues -Click on image for an interactive view with Cn3D
Feature 1:Fe-S cluster binding site [ion binding site]
Evidence:
  • Structure:2vpw: Thermus thermophilus polysulfide reductase binds to 4 [Fe-S] clusters; contacts at 4A distance

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #### ##   #   #           ## #                  # #####  # #   ##   #    
2VPW_B         6 MAIDLSLCVGCaACAVACKMENevp----pgVFNLWIREREvgey--pnlvVEFRPEQCLHCENPPCVPVCPTGASYQT- 78  Thermus thermop...
EAT05135      11 MVVDPRKCIDCrACDVACKRENkietdgrhyTYRNWITSKGvegtf-pnlkQRFEPSQCQHCQNAPCVKVCPTTASRYT- 88  delta proteobac...
ADU67319       9 IVLDPDKCIDCkACDVACKRENgidakgkqdVRRNWIGTEGiqgty-pnlkQTFQPEQCHQCANPPCVPVCPVKATYAR- 86  Desulfurispiril...
CAE09833       6 MALDYKNCINCkACETACKEENnvplgdeyyRIWVGVKETEgeypllnfsqMRFIPSQCQHCENAPCQEVCPTNATYYD- 84  Wolinella succi...
WP_007293709  69 MVMRLNLCIDCeLCVAACRETNqvp----dyGWRTTILERSlpqm--anrqTEFIPVLCMQCNNPPCVRACPTKATYKDq 142 delta proteobac...
ABB37482       7 MVIDSARCIDCkACVVSCKVANnvp----agFSRNWIKADGpvvkagkgpfGHFQPGACMHCESPTCVEACPTGATWKDr 82  Desulfovibrio d...
P31076         7 MIHDENLCIGCqACNIACRSENkip----dsVYRLQVWVQGpkklpdgtlsFNYHRQSCVQCENTPCVSVCPTKASYVN- 81  Wolinella succi...
KPK36959      72 MIIYKDRCIDCeRCIEACTQTNsvp----ayGYRNTILSRKkkgiaaskmiREFLPVLCNQCNRPPCVRVCPTKATYKDk 147 Nitrospira bact...
EET79304       7 MIHDENLCIGCqACSVACRSENevp----rgVFRLQVHSQIkgkf--pnlkTDFSRHSCVMCEDAPCVTVCPTGASFQT- 79  Campylobacter s...
EGW43470       6 MAIDANKCINCkACVLACQQRNgtp----ygHSRNWVRETPdkls---llgTAYQPGACMHCDHPLCVEACPTHATYKA- 77  Bilophila sp. 4...
Feature 1            #      #######   ### ##        # #####           ###  ## # ##               
2VPW_B        79 KDGLVLVDPKKCIACGACIAACPYDARYLHp-aGYVSKCTFCAHRLEKGk--vPACVETCPTYCRTFGDLEDPESPVAKA 155 Thermus thermop...
EAT05135      89 PDGLVAIDYKRCIVCAACILACPYDARYKSaqtKVIDKCTFCAHRIAEGk--lPACVDTCPTKVRVFGDLNDPDSEVSRL 166 delta proteobac...
ADU67319      87 EDGVIVVNKSTCIGCTLCVISCPYGARYMSe-nRKADKCDFCSHRVAQGk--vPACVDTCPTKVRVFGDMNDPNSAVSRL 163 Desulfurispiril...
CAE09833      85 ERGFVSVDPKKCIMCTYCMTACPYDARYVDpraHIVQKCNFCSETRLARgettTACQATCPTKVRVFGDLDDPHSEISKL 164 Wolinella succi...
WP_007293709 143 QHGIVMMENRKCIGCKTCVIACPYDARFFNeetHAMDKCDFCIHTRLAKgeklTACSAACPTGTRTFGDLADPESKVYRL 222 delta proteobac...
ABB37482      83 ETGIVEIDPALCIGCGNCIPACPYGARFRNpqrRIADKCNYCPERRAAGl--pPACVDTCPTKARVFGDILNPETEAARL 160 Desulfovibrio d...
P31076        82 EDGIVSVNVDLCVGCLYCIAACPYQARYVDpvtKAPDKCNFCKDTRLARge-ePACVTVCPTDALTFGDMSDPKSKINKV 160 Wolinella succi...
KPK36959     148 ENGIVMVNESLCIGCKACMTSCPYYARYYNretQAVDKCDFCYRKRLQHgetnTACAEACPANVVIFGDLSDQKSDLYKL 227 Nitrospira bact...
EET79304      80 AEGIVLLDHSTCVSCKYCILACPYDARYVEpktGEIGKCTFCFETRVSVge-qPACVTVCPTDALAFGDINDPNSEVSKI 158 Campylobacter s...
EGW43470      78 DDGSVGIDPERCIGCGGCIEACPYGARYKHpvtGRADKCDYCRRATPGQv---PACVQVCPVRCRVFGDADNPDDPVARA 154 Bilophila sp. 4...
Feature 1                                 
2VPW_B       156 Lkaae--rvdvLRPEQGTRPKLFYL 178 Thermus thermophilus HB27
EAT05135     167 Larhh---yrvQRPEMGTQPSLFYI 188 delta proteobacterium MLMS-1
ADU67319     164 Lranp--karvLQPEKGTKPNLHYI 186 Desulfurispirillum indicum S5
CAE09833     165 Lrere---hwtIKPHLGTKPKLFYL 186 Wolinella succinogenes
WP_007293709 223 Vhqlek-qvwtIRAKAGTKPNVFYM 246 delta proteobacterium MLMS-1
ABB37482     161 LtrnsghvtqlIHEKSNTAPHMYYV 185 Desulfovibrio desulfuricans G20
P31076       161 Laskp---tlrPKESLGTKPKLFIV 182 Wolinella succinogenes DSM 1740
KPK36959     228 Lhkpdq-tiqvLRPGAGTMPNVFYL 251 Nitrospira bacterium SG8_35_1
EET79304     159 Lntka---hyyPKAELKTKPKLAMI 180 Campylobacter showae RM3277
EGW43470     155 Lagnr--nvyvVPPDFDAKPTLAYL 177 Bilophila sp. 4_1_30

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