Conserved Protein Domain Family
LtrA

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pfam06772: LtrA 
Bacterial low temperature requirement A protein (LtrA)
This family consists of several bacteria specific low temperature requirement A (LtrA) protein sequences which have been found to be essential for growth at low temperatures in Listeria monocytogenes.
Statistics
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PSSM-Id: 462006
Aligned: 97 rows
Threshold Bit Score: 121.255
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCT62618       188 AIELFFDLLYVGIIHVNGEH-----VWAEPTGK----ELL-RFAITFIMSWKIWSDITLILSWFETDDVFTRLEILFEIA 257
WP_014214916    23 WLEVFSDLIYVVIFHQLTVG-----LMEGHNFE----NYG-KFLILFLLIYWTWSDFNFYFDSHGDTSLRTTTLSVLQMA 92  Pediococcus c...
WP_007747262    22 WLELFYDLIFSVVLERLTSG-----LVADFSWP----RFF-NASVLFFWFFWSWHETSGYFDNHGNDSILNVLIINVQLI 91  Oenococcus ki...
jgi:EAT1b_1012   8 WLELFYDLVYVAAIATANHV-----LLHTHHGVipfeYAS-KFVLMFIPIWWAWVGQTMFINRFFEDAIHQRLFVIGQMI 81 
WP_013370757     8 WLELFYDLLFVAAVSKATHV-----LLHVEHGSagwhNLE-KFILIFIPIWWAWVGQTVYNNRFGQDSITHRIFMILQLF 81  Paenibacillus...
CCO09607         8 WLELFYDLVFVVAISSTSHL-----LTTVNQQPrhffAITgEYLLMIVPMWWAWAGQTMFLNRYRLILKNPHYYTFIQMF 82 
Q8DTT2          11 NYELFFDLTVVLAIGQLTSAihlnhIGLQ--------EVL-AFITTNIIIFNIWHNEVLYFNKYGD----SRLQDIYTII 77  Streptococcus...
Q2G1V3          17 FHELFFDLIFVYAIQKIAHV-----ILTTQNGSisadLFF-KYIVMSLFLWLMWSHQTFFTNRFGQVTFKDVSFMMFNMF 90  Staphylococcu...
WP_012903116    12 FSELFYDLVFVFAISKATAL-----IHPLHDGVvawdSLL-DFFISVMVIINAWMIQTIYTNRYGTNSLFNMVIMFTNMG 85  Rothia mucila...
Q74HW9          11 KIALFYDLVFVYMISKTTEI-----LHHLEHGLvsptSFA-LFALIVIIFINSWMIQTVFTNRYGIGSWADIAFYFIDMM 84  Lactobacillus...
CCT62618       258 CLLGFSTNMTYAFYPGEhn------tyTMLVSFYVAARFRGVFHFLY---------TGYllpmVRGVMFCQALNIIVPAA 322
WP_014214916    93 AISFSALYIPEFFHGHY----------TSFILAFALNQLMITYLWWGsg-----hfDPDhhqyAHDHNRQY----WISLV 153 Pediococcus c...
WP_007747262    92 LAGIAALFIPDAIAGNY----------TNILIAFVPMELLLIAVWYIig-----hfDPThgpaSRAWATVY----SFALL 152 Oenococcus ki...
jgi:EAT1b_1012  82 FVLIMTASLNVDFDDYY----------YSFLIGYLGLRVMTVLQYTMvnrri-------qdpaARFLGTYFWIGIGVSSL 144
WP_013370757    82 FVLIMTASLNVDFDAYY----------ASFFVGYIGLRGLTVVQYLLtapketahkQET----ARFFGTYLWVGIVISSC 147 Paenibacillus...
CCO09607        83 FVMLMTASFNLNFNETY----------FTFLLGFVGIRVLTIVQYHSvkrcidnpaDKKi---IQLLTNYFTFSLVLSST 149
Q8DTT2          78 ALMFIVGNISLNFSLNIkgyyagnpqlMLFNFLLMLAYAFIALQYFLkgkklgfshNIKlsilSQLSYSLPLAGLALg-- 155 Streptococcus...
Q2G1V3          91 IMVFLSNSLYPDFEKTF----------FPFFLCVAIMYLSIGLQYLLhirt-gldyGD------KRTCQAFASVAFVISF 153 Staphylococcu...
WP_012903116    86 LMLFISNMIGYNWQQWF----------YYTCWAVGTLTLTLFFQYLVeffrkstdnTD------RKSIKGFLWLTGLQSL 149 Rothia mucila...
Q74HW9          85 ILLYMSNSFDTNNLTEM----------KVLFISAGLLSLTLASHYLInyfqvknsvD-------RNISRAFFMILIFRAL 147 Lactobacillus...
CCT62618       323 LWIASihVEMP-SRLGLIWVAIALDMcgqsiltgvyqygrkaahdkrivkylsgifeFFPA------------VNIEHRV 389
WP_014214916   154 IQLVAaiIPNSkIQFALIIISIISNYsagyfarkaaq---------lefqkrgiefeISPA-----------------LS 207 Pediococcus c...
WP_007747262   153 LLHIGlfAPTA-GKFVIILATLLINYlvv--------------------------ffANPRlrreyenthmpfVLKDSLI 205 Oenococcus ki...
jgi:EAT1b_1012 145 SIFFDg-----sLRYVVLYLGLIIDL-------------------------------IVPIigrkr--lamtpINLGYLL 186
WP_013370757   148 SLFFDs-----wVRYLILYTGIAVDI-------------------------------LVPLigrkk--lvitpIHTEHLL 189 Paenibacillus...
CCO09607       150 SLFFTg-----fPRYFILFFGIFLDI-------------------------------VMPLinrkt--lrdspVDVSHLA 191
Q8DTT2         156 -----------lLPLNIWTALIYLLPn------------------------------LLPIfsrkf--ynhqlLNFPHIV 192 Streptococcus...
Q2G1V3         154 LSFLSlvLPQS-IHYIPGFLGVFIAAt-----------------------------gLIPfqkyl----vlspVNMMHLV 199 Staphylococcu...
WP_012903116   150 GVYLAalFPIY-VGVYIFIASILLTF-------------------------------IVPIflmtk--dehfqVNLPHLI 195 Rothia mucila...
Q74HW9         148 TLIIGgiLDNI-FGFILAVIGIILSW-------------------------------LMPLlttky--tlkhpIIFPHLL 193 Lactobacillus...
CCT62618       390 ERTNAFVSLVFGYSVMGpmf---qshGGYTVDVFLgkaVLGLCQAFVFNWIYFDVdGSNINIHAIRr--sVISSSVWHYA 464
WP_014214916   208 ERYSQLMIIVMGESLAElidsmsdvhKTVSMLSLFftsAFITLLIYLLFYINFDH---------------ILIKKGYGWM 272 Pediococcus c...
WP_007747262   206 ERYGLMTMIALGEVIVGlyeai----ghpvTMLGLtefIMSIVLVALVTAVYYQV---------------------IGEL 260 Oenococcus ki...
jgi:EAT1b_1012 187 ERFGLLTIIVLGESIISilavlepqdGDIRSISFS---ILAFIVLIAIWWQYFDNiEKKVDKDAVGtgq------iilYG 257
WP_013370757   190 ERFAQFTLILLGESVISilsvlqsdhFTVSSIVFA---ALTFVLVIAIWWQYFENiEKRVDKSKQTagq------tiiYG 260 Paenibacillus...
CCO09607       192 ERLGLFTLICFGETVVAliailngqtMDVSTLLYV---IVAFVAISLMWSSYYAHlDWIIDKKQLTngq------lllYS 262
Q8DTT2         193 ERLHLVTLLTFGESVIAiiktypl-------kdqpltgFMLFFGMATLFVFYMGQtFLNINHHQETtas------ilfYA 259 Streptococcus...
Q2G1V3         200 ERFSLLTIIIFGEVLVGlasssfsi------dhfsyiyIFQFMILISLFGVYWII-TENYINHKLTsigfRLS-----YT 267 Staphylococcu...
WP_012903116   196 ERVSLLVIITFGEMVIGlvdfftv-------enfsiysVLNFVIMLSLFLFYFGEfDHAIDEGSNQkgv------fiiYS 262 Rothia mucila...
Q74HW9         194 ERLNLLVIIIFGETIIGiadyfqp-------ktfsfysILIFLTVALLFFTYALQfDKLINEDQEDvtgn-----iliYL 261 Lactobacillus...
CCT62618       465 HLPFIMGYILASAGLSKLVwvadtpdanpehltehyiersDPEMADGIRYFYCqGLAVALFFMGVISVThdhrhpatrrl 544
WP_014214916   273 YLYRQSFVVITLNSILEIL-----------------------------------FIHLILFEPSHLI------------- 304 Pediococcus c...
WP_007747262   261 HVQMASSIQVMAVRWLFLL---------------------------DIYAVML-FGVFLIFVLEKDQLT----------- 301 Oenococcus ki...
jgi:EAT1b_1012 258 HLFIWMSLSVLASMMKLMY---------------------LGELDERFEVMVT-FGAVLVYFLSTTLVFhnh------rf 309
WP_013370757   261 HLFIYLSLSMLAASIQLLF---------------------LGQAAYTFVLCFT-FASVFIYFLSVLLVFhqy------rl 312 Paenibacillus...
CCO09607       263 NLFMLISITLFAAALHLGH----------------------HPVLPFRLINLLfIFSFLLFYSTKHFIFiyhp-----rk 315
Q8DTT2         260 HLPIFAGINIFTVGIEFLAesh------------------------------haNIGFILFLAGIISFY----------- 298 Streptococcus...
Q2G1V3         268 HLLINIALGVINAAIVFSNnn---------------------klNDLFEINMM-YISVLIFYIGLWLITpyfhne-ltna 324 Staphylococcu...
WP_012903116   263 HYPIFIGLMLMTVSMGYLLnp---------------------eaNLLVAIIFF-YIGIGLFQAAVLANGpynknylrypr 320 Rothia mucila...
Q74HW9         262 HYLIIFGISLITVSIKFIHes---------------------daNSWFAVLCL-YCGIGLFYLGLLFSThynklqfklkk 319 Lactobacillus...
CCT62618       545 sKKTRMANRLLVCLILFL--------------------------LPLAKSLNSLNL-----ISITLALSL 583
WP_014214916   305 -QTALAISTITMVLSMIFlpislnknshfrwnaienlfkllgliIIITSIFLPISFalyllAVGLSIIVA 373 Pediococcus claussenii
WP_007747262   302 -QRLWLSFLLFASLFVMWliqkitshdqqaqgenkplffmfefaAMLAVAFLHKSWmilclDLIMLLVil 370 Oenococcus kitaharae
jgi:EAT1b_1012 310 pESRLHWGYFVFFVALILvftg------------------lhlfVLVSPLIIMIELaiffaiyaklttt- 360
WP_013370757   313 sHLKPRLRVILFLTGILCvlfi------------------lnifIVVPHLIVAAIMlffllfakmtv--- 361 Paenibacillus polymyxa
CCO09607       316 kVAKKTVRKIIGLGVFVIlfgs------------------tafvISVTPIWILAVlvvissldnlisyef 367
Q8DTT2         299 -LGVLATSRYNK-------------------------------------------------DLYRFDLKA 318 Streptococcus mutans
Q2G1V3         325 kYISYSLGILVMSYIVSLlfkg------------------hdhvMIISVSVATFCimliyfknqrlrnkh 376 Staphylococcus aureus s...
WP_012903116   321 sYYCVQATLYLAALILSLlfas------------------naiaVLSIATIftlaiashfisfwvartkq 372 Rothia mucilaginosa
Q74HW9         320 sTIFLFISTTLIGTISCLiwss------------------feviTILTFIIVSINIswlvhanlphikkg 371 Lactobacillus johnsonii
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