Conserved Protein Domain Family
PotD

?
COG0687: PotD 
Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]
Statistics
?
PSSM-Id: 440451
Aligned: 807 rows
Threshold Bit Score: 117.319
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_077327615   5 Y-KVfsiifSIl-lVI-T-LpLAlcsCst-qKSSKNDEIILRIANWEEYLDEgdwdddeeielengkkiigrnSMIKDFE 79 
WP_054540305  11 LnRR-----RFlqsSA-A-VtAGlaaPaivsRQALASSGEINIMMWSDYLPP---------------------SFVEAFE 62 
WP_113156702   6 LsRR-----AIlrgAS---SaALaapFiargSWARASSGELRLAAWAGYISP---------------------EMLDAFE 56 
WP_044615589   3 VsRR-----QFvkgSL---AaGIaatSpfylNRALAASKELRIYAWAGYITD---------------------EMLKDFK 53 
WP_117411324   3 LsRR-----SIlqgTA---AaVLaspAilraQDALASSGTVNVFAWGDYIQQ---------------------NMIDKFQ 53 
WP_041783009   1 M-K--------------AgAaALaapAvlraHDALATSGTLNVYAWKGFFDQn--------------------TLLADFT 45 
WP_051140017  16 FtRR-----LLlqgTA-A-AaGVaavGpfilREGRAASGSVKIFSWAGYISP---------------------DMLADFE 67 
WP_069691256   9 FaRR-----DVl--kL-A-AmAGvamPalisRGALASSGEINIMMWSDYLPE---------------------SFVKGFT 58 
WP_014744911  21 FtRR-----GLlkaSAlG-GaALaltGpailNPARAAGGEVRIFAWAGYVTD---------------------EMLDAFK 73 
WP_076703999   3 LtRR-----TAm-qLT---AtAVaapAilraHDALAASGSVKVLAWQDYVQP---------------------NIAEAFE 52 
WP_077327615  80 NWYektyhkKVKVEYSTFGTNEDMYNQLTIG--DTYDLICPSEYMTMKLMAE-D--KILKYSDEFWdtsdaNNyYaKGVS 154
WP_054540305  63 GST------GIKINFTGIGSNEEIINKLKATggEGFDIVSPTVNRNLLWAEl-G--LLQPFDMSKI-----AI-E-KVNP 126
WP_113156702  57 KAT------GIKTTYTPYGTNEEILSMMRVNqgSGFDAIWPALDRVPNYVED-G--LIQPIDESRV-----EW-D-RCID 120
WP_044615589  54 AKT------GINATFTPYGTNDELMNSLRATdgTGFDIIMPTVDRVPGYLDf-N--LIQPLDTTRI-----NW-N-GCLD 117
WP_117411324  54 GDT------GITINLSTFGSNDEAVQKLKAAggKGFDVIYPSVTNGPQYYPD-D--LLQPVDEDKL-----AL-D-KLIP 117
WP_041783009  46 NAT------GINIQLSTYTSNGEAEAKLRAVggKGFDLIFPSVDTGPNYYKD-D--LLRPIDEAKL-----KV-A-QIIP 109
WP_051140017  68 KKT------GIKASLTEYGTNDELLNQLKATggAGFDIIHPTVDRVPNYVEf-E--LVQPLDESKV-----KW-D-GCLK 131
WP_069691256  59 EKT------GIKVNFTGIGSNDDILNKMKASngQGFDIVTPTVNRSPLWKDl-G--LLMPFDMKKV-----AI-A-KVNP 122
WP_014744911  74 AAT------GITPVRTEYGTNDELLNQLRASqgGGFDIIWPTVDRVPNYVEf-E--LVQPIDEGKV-----AF-D-RLLP 137
WP_076703999  53 AET------GITLDLTTFGSNDEAQSIVRASngGDFDVVFPSIDTAVNYLDEnGdsYFAPVPET-V-----NM-D-AIYP 118
WP_077327615 155 PYIKKSldQ--L-KyQgqsvGDYTAGYMWGTLGYVYNPKYVSrE-DAEDWGLLLNQKYY-KKITAKdSVRDCYFAVRG-- 227
WP_054540305 127 AMAL-GdaHwnF-D-Gk---GSHWVPHIWGTEGVAWRTDLFTpAgEFPSYYDIWDDANA-GKTMGR-GHSMLLGLGLGle 198
WP_113156702 121 SAIKSSetLgaVvD-G----KRYQVPTDWGTEALTFDTEKLPlEyGSASYADLWQPELA-GKVTVR-GHSALVGLALWle 193
WP_044615589 118 SAMSGSe-VggViD-G----KRYFAPSDWGTEAICYNTEEARvDpKNLSYGDLWKPEHN-GGVTVR-GHSALVGIGLWle 189
WP_117411324 118 SMLRDSvqLgaTyR-G----KRMLLPFDWGTEAITFDSAAMPmSdSDVSYGAMWSKDAN-GKATFR-QKSGMVGVGLYld 190
WP_041783009 110 SIYRSSlkLgaEyR-G----RRYLVPFDWGTEGLTWDSTKFDaKsGEISYGALWLPANP-KQTAIR-PTSAFTGVALYld 182
WP_051140017 132 SAVEGSaaMggVvG-G----KRFFAPADWGTEAIAYDQAKAPlTyGTASYGDLWKPEHA-GKVTVR-GHSGLIGIGLWle 204
WP_069691256 123 AMA-LGetHwnF-A-Gk---GSHWLPHIWGTEGVSWRTDKFTpAgTAPSYYDVWDDANA-GKTMGR-GHSMILGLGLGme 194
WP_014744911 138 ATISGSagMggViS-G----KRYIVPVDWGTEALTFHKQQAPlEyGKASFGDLWKPDFA-GKVTVR-AHSALAGLGLWle 210
WP_076703999 119 SFLRDSvaLgaThA-G----KQILLPHDWGTEGLTLNRAALPiAdADLSFGDLFTQEAArGAAAFR-QKSVIMGAGLYld 192
WP_077327615 228 MQtqkeiltkkfqnqsnykerlSSLLN----D------TSDQSIQNAGMILSKIKDNVYSFETD--SGKADLVSGKVvaN 295
WP_054540305 199 RI--------------------GELEPgsmwAayttpeKMTEVWTKVVDHAIAKKGNIKLIWNDadTQKNGLLNEGVivG 258
WP_113156702 194 RE--------------------GKLPRpf-lDsfkdadAMRANYDVILAEAIARKATIAQFWSNqnEAQGAFRTNGCilG 252
WP_044615589 190 QQ--------------------GKLPFpl-lDsyknekAMRANFDVILKAAVEHKGMIAQFWSTenEAQGAFRTNGAiiG 248
WP_117411324 191 SI--------------------GEVKSdrmlDvyksedEARRVYGAAADFIIAHKANVAAFWNNatEATNAFKQAGAaiG 250
WP_041783009 183 AT--------------------GELPSdraqDmykseaDARRVFDGCLKFLLAHKANIGATWNNaaEATAAFVSGGCtiG 242
WP_051140017 205 GQ--------------------GKLPHpi-rEqfkdeaKARANFDAILQVAAANKKAIGQFWSNenEAQGAFRTNGCviG 263
WP_069691256 195 RR--------------------GELAPgsvwEayktpeKMTEVWTKLTEVAIKKKKNIKLVWNDadAQKNGLLNEGVivG 254
WP_014744911 211 SE--------------------GKLPApy-rDsfkdeaTMTKNYDVIIAEAIKHKKNVGQFWSNenEAQGAFRANGCviG 269
WP_076703999 193 AT--------------------GEVPSnrmlDvyksedDARRVWGAITQWILAHKENIGAFWNNatEATAAFKDAGCviG 252
WP_077327615 296 LQWSGDGVYSMQQ-VeeegIKLRYAVPKASTNLWFDGWCmlksgIGKDKEKQQAAQAFVNYISRPDNVVRNMYYVGYTSV 374
WP_054540305 259 QTWDGPPIALKTA-G----EPVMYRAPVEGAMAWVDGMA-----LPTGAKNIEQVYAFIDACYNPEWAGTAIQTHGYNSP 328
WP_113156702 253 QTWDSTAAGLKDE-G----LPISYLAPREGALSWMEGIS-----LPLGSENVEQAYAFINWMLTPEAGAMYASHARVNTT 322
WP_044615589 249 QTWDSTAFKLQSE-G----EPIAYGAPKEGALAWMEGFV-----IPKNANNVDAVYEFINWYYTPEAGAMFVKSTGYNST 318
WP_117411324 251 QTWDTTGLLLNRE-D----AKYKYRMPKEGGITWMDSMG-----IPSGAENVEQAYAFINAMLDPEMAGMFSKNTGYNSA 320
WP_041783009 243 QTWDSTGIALHRDtD----RKWRYGMPKEGGLAWTDTLA-----IPSGAANIEQAYAFANFMYQPDIGARFANTTGYNSC 313
WP_051140017 264 QTWDSSAVALRKE-G----LPIRFLAPKEGALAWMEGFA-----IPAKAANLEQAYAWINWFYTPEAGALYTNHSGISST 333
WP_069691256 255 QTWDGPPIALKTA-G----EPVMYRAPVEGAMAWVDGLS-----LPIGAKNIDQIYAFIDACYDAKLAGEAIKTHGYNSP 324
WP_014744911 270 QTWDSSSLALSKE-G----LPFGYVAPKEGALAWMEGVC-----LTSKAPNLDNAYAFINWLLTPEAGAMLANHMGYNST 339
WP_076703999 253 QTWDTTGLLLNRE-N----PDYVYRAPKEGIITWMDTMG-----ILRDAPNPEQAVAFINFMLKPETGGMFANNTGYNSA 322
WP_077327615 375 ISGGEDktiydyikYMYGSedkksvdydlnyffqqngdnynyvmktseemskgqLYAqyptQDVMRRSAVMTYFGDQank 454
WP_054540305 329 VLGADA--------FGGEIya--------------------------------qNFAdaypGEALANLNAWPAEGPWyse 368
WP_113156702 323 AKGADA--------FLPQEmk--------------------------------tFFQnaypEDAIDNLWWWPVQENWfve 362
WP_044615589 319 SKGAEA--------LLPEStk--------------------------------kFFSssysEKDLANLWWWPIQEPWyva 358
WP_117411324 321 VLGAAD--------HAGDEyk--------------------------------aQFNevynADNLANLWWWQADQPWtsp 360
WP_041783009 314 AAGSQN--------YLSAEdr--------------------------------sAFEaaypAGTLDKLFWWPMQTDVylt 353
WP_051140017 334 AVGAEA--------HLSDLnk--------------------------------qFFAdaypGDALQKLWWWPIQEAWyvs 373
WP_069691256 325 VVGADK--------FGGEVya--------------------------------kNFAdaypGDSLAKLNPWPAEAPWyas 364
WP_014744911 340 VKGADA--------LLTPEnk--------------------------------aFFAaaypGDALDKLWWWPVQESWfva 379
WP_076703999 323 VVGAAD--------YASDEfk--------------------------------rQFNevytEEVLGNMWWWQASTPFfdp 362
WP_077327615 455 KISRMWIDMR 464
WP_054540305 369 MRTEFTNKFL 378
WP_113156702 363 IRGEYQDKFL 372
WP_044615589 359 LRNEYQDRFL 368
WP_117411324 361 VVGEFVDKIT 370
WP_041783009 354 LRSEYVGKLA 363
WP_051140017 374 IRNEYQDRFL 383
WP_069691256 365 KRSEFTNKFM 374
WP_014744911 380 KRNGYQDQFL 389
WP_076703999 363 IRNEYVEILT 372
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap