Conserved Protein Domain Family
YmaF

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pfam12788: YmaF 
YmaF family
This family of proteins contain 6 HXH motifs and is named after the B. subtilis YmaF protein. It seems likely that these are involved in metal binding. The function of this protein is unknown.
Statistics
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PSSM-Id: 463706
Aligned: 17 rows
Threshold Bit Score: 99.7052
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q181M3                19 EMTHVHEYSESVKLA-EECEDRHNHRAAGVTGEAIPInGGtNHVHKINDNVD-FLDHFHKICVTTGPAIRIpGTDKHIHL 96  Clostri...
WP_044038514          10 ERNHNHEFIGSTKLA-ERGEERHNHRFAGVSSLAIPC-GR-SHYHVLETTTDsL-DHIHKICVKTGLAVYL-ENGEHVHF 84  Clostri...
WP_012200817          13 KQTHVHEIQGSVEIA-EQN-DPHSHRFATISGEAIPY-GM-DHYHEVSFKTDfFREHYHEFQGHTTTAIPI--GNSHLHY 86  Lachnoc...
CDC42101              11 pKQHNHEITGSTSIS-GCCEYAHNHRFATVTGDAIPC-EG-SHVHEVKFKTDsCNGHHHEFCGTTEKAVDI-GCGKHIHL 86 
WP_002583565           8 sMQHVHEILGSTLIA-ERCDDPHNHRFATVSGEAIPY-MG-SHVHRVTFLTDsYDGHFHEFSGTSSPAIPV-GDGRHIHF 83  Enteroc...
jgi:Desdi_0593         2 ySNHVHSYGALTSCV-----NAHIHCTSGITGPVVSY-GN-SHVHYYAGVTTcDHGHVHHYRGCTGPSIPC-PNGGHVHC 73 
WP_022744884          25 IINHNHEFLSSTDYArDDNGDVHNHRIAGVTSPPIRY-RE-SHIHIVEVLTDtFDDHFHVIRYTTGRAINL-PGGKHIHL 101 Clostri...
goetting:Cspa_c36290  24 VKCHNHEFEASTDFEkDDEGRIHNHRIAGVTGPAIKY-GK-THVHKVNELTDtFDDHFHGICETTGPAIYL-PSGKHFHV 100
goetting:Cspa_c51630  22 RETHNHEFQSSVDYVkDDEGIEHSHHIAGITGPSIRY-GQ-SHVHKVNVFIDtSAHHYHEISETTGPALYL-NGRKHVHL 98 
goetting:CLSA_c15930  22 RKSHNHEFQSMTDYEkDNEGMEHTHHIAGITGPSIRY-EQ-SHIHRVRAYVDtSGDHYHEISDTTGPALYL-NDKKHVHL 98 
Q181M3                97 ICGETTVNDGHCHKFLFTTQI 117 Clostridioides difficile 630
WP_044038514          85 VEASTSCSDGHSHCFEVATLI 105 Clostridium bornimense
WP_012200817          87 LESVTTANAGHKHGFRFATLI 107 Lachnoclostridium phytofermentans
CDC42101              87 LKGCTSYDANHKHEFIVSTdm 107
WP_002583565          84 AKARTTFQDGHTHEFRVSSLI 104 Enterocloster clostridioformis
jgi:Desdi_0593        74 LQGCTTCDCGHSHSYRASTsn 94 
WP_022744884         102 VRGVTSRNDGHQHNFYFTTLI 122 Clostridium saccharobutylicum
goetting:Cspa_c36290 101 ISGSTTVSDGHKHDFYFITQV 121
goetting:Cspa_c51630  99 LRGTTTYDDGHEHNYYLITQV 119
goetting:CLSA_c15930  99 IRGTTSYDDGHTHDYYFITLV 119
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