2B3Z,2G6V


Conserved Protein Domain Family
RibD1

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COG0117: RibD1 
Riboflavin biosynthesis protein RibD, pyrimidine deaminase domain [Coenzyme transport and metabolism]
Riboflavin biosynthesis protein RibD, pyrimidine deaminase domain is part of the Pathway/BioSystem: Riboflavin/FAD biosynthesis
Statistics
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PSSM-Id: 439887
Aligned: 966 rows
Threshold Bit Score: 142.12
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2B3Z_A        15 EYYMKLALDLAKQGEGQTESNPLVGAVVVK-DGQIVGMGAHLKYGEAHAEVHAIHMAg----------A----HAEGADI 79 
WP_013287248   7 LAAMRQAIILSSLGLGTTSPNPPVGCVILDrHGATVGAGYHRRKGEAHAEVNALSAAg----------P----AALGGTA 72 
WP_084672881   7 SAAMRRAIALSAFGLGRTSPNPPVGCVVLDrEGRVVGEGYHERKGEPHAEVNALAAAg----------D----RARGGIA 72 
WP_052809189  72 LAALRRAFELSARGP-ADDPNPRVGCVLLApDGGVIAEGWHRGAGTAHAEAAALAAAra-------agS----DVRGATA 139
WP_046010302   5 QEYMALAIQLAKRGLYTTSPNPRVGCVLVK-NDEIIGQGFHIKAGEGHAEVNAIADAkl-------rgN----DTQDATA 72 
WP_071893282  11 QQLLDAALEQAKNG--VRGVNPLVGAVIADaQGDILATGFHRGAGTPHAEADALHNLaqllgkaltagQdqtiDPATLTM 88 
WP_080039160   7 VAAMRRAIAVSALGLGTTSPNPPVGCVILDsDGRVIGEGFHRRKGEAHAEGNALAAAg----------L----GARGGTA 72 
WP_084133894   1 ---MRHAIALSAWGRGTTSPNPPVGCVVLDsDGRSVGQGWHRRKGEPHAEAHALAQAg----------R----AAAGGTA 63 
WP_130109865   8 EDAMRRALTVSRRGP-ADDPNPQVGCVLLDpDGRIVAEGWHRGSGTPHAEIDALQQLpea------wrS----RTAELTA 76 
WP_084253057  40 HRAMQRALELAARGP-QHDVNPQVGCVIIApDGTRCGEGYHRGSGTEHAEIAAINDAhs-------rgK----CTRGMTA 107
2B3Z_A        80 YVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVaGrGISMMKEAGIEVREgI-----LADQAERLNEKFLHFMR 154
WP_013287248  73 VVTLEPCNHVGVTPACRQELIDAGIARVVISLIDPTSRGeG-GAAVLTAHGIDVETnV-----LPDETLTVLGPWLTAIR 146
WP_084672881  73 VVTLEPCNHHGRTPPCRQALLDAGIARTVIALIDPTSREeG-GAARLRAAGVDVEVgV-----LADEARVVLGPWLYSLG 146
WP_052809189 140 VVSLEPCAHWGRTGPCAVALADAGITRVVFSVPDPNPVAaG-GTQVLRERGVEVIGgV-----AEASGREALGDWLARQV 213
WP_046010302  73 YVTLEPCSHFGRTPPCSQGLIDAQVARVVGAMTDPNPQVaGnGFNRLRAAGIEVVDnC-----LAAESAKLNPGFIKRMS 147
WP_071893282  89 FVTLEPCNHFGRTGPCSHAIVDAGIGRVVYAVADATDHAaG-GASYLKEHGVKVMDgEqlnpeWARASRELNARWFQA-- 165
WP_080039160  73 VVTLEPCNHVGRAPACRALLIEAGIARVVVAVIDPTSRGeG-GVAELRRAGVDVEVgV-----LRDEAELVLRPWLTALG 146
WP_084133894  64 VVTLEPCCHHGHTPPCHRALIEAGIARVVIAVLDPTSRGrG-GAALLHEAGIGVAVgF-----LAEEAHLVLGPWLAALE 137
WP_130109865  77 VVSLEPCNHTGRTGPCARALVEAGIGAVAYALSDPGAEAgG-GAATLRAAGVEVRGgV-----LPGEARAVLGPWLARQT 150
WP_084253057 108 VVTLEPCRHQGKTGPCTRALQQAGIARVVYALPDPGERS-GrGSRNLRAAGIEVVGrV-----MEDQARQLIEHWYTRAC 181
2B3Z_A       155 ---------------------TGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNP 213
WP_013287248 147 ---------------------RRRPYLTWAYALEGQDSQISCEQLTAELRSGTDLVLGEKTIEEGTPGGHTPQHFTLPGE 205
WP_084672881 147 ---------------------TRRPQVTWAYRVGPDGRIRALTDAQVDALSGAVDVVLRGDGHVVEGVPGGHGTDAFHLP 205
WP_052809189 214 ap------------------lPGEVGARPQVLVKMAATLDGRVAAADGTSRWITGPAARDHAHGTRARVGAIVVGTGTLL 275
WP_046010302 148 m-------------------aADTALPYVRLKMATSLDGRTAMQSGESQWITGPEARADVQRLRAQSCAIICGADSVLID 208
WP_071893282 166 ---------------------QNQQRPFTTLHLAQTLDSNIAASDGTSQWITGAESREHSHVIRSRADAIIVGTGTIVAD 224
WP_080039160 147 ---------------------RGTPFVTWAYRADSEDGRRVPALDVRGYDAVVGPDGQLREGTPGGHGDTFVLPGELPQG 205
WP_084133894 138 ---------------------RQRPVLTWGCSLTPRGTLTSDATALPREIDTLVHDDTTATTATEWPTSRPLFTLPNDPH 196
WP_130109865 151 sstassvlr----tsaeredaLGGIGTQSDALLHAPGRPHVTVKWAQTLDGRAAAADGSSQWITGVDARADVHRRRAEAD 226
WP_084253057 182 ggqvhtaachahstvrqvhttARDCADAARSPRPANHGADGVHLVLKTATSLDGNVAAADGSSRWITGAAARAHAHTVRA 261
2B3Z_A       214 SLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAE 293
WP_013287248 206 PSDDLQRWLSACYATGSRTAIVTGGRHAGVLRDNLNCVDELVVAVEKAPPGCGLAAVTADLAHAGFELADISPGSPGVRV 285
WP_084672881 206 SLRAGVPLDDLCDALYDGGARSVLLASEREYAENFLRTGLVREAVVLVSSNGPSSTPSGEGASVLPPGFTLRDVSRIGDD 285
WP_052809189 276 ADDPALTARLPDGSLADHQPLRVVMGTRPVPDDAAVRGPGGALLALRTHDPAEVLRELSSRGVREVLIEGGPTIASAFLA 355
WP_046010302 209 DPSMNVRIQTEAADGAFQETRQPLRVIIDSQHRVTANAKIFTHPGKVMIVSPVAPESTIHSDVCSVSYLQTATNENSDRQ 288
WP_071893282 225 NPQLTARDSAGELYPKQPVRVAMGLREIPADARIRDHGEFMHLPTRDPAEVLEALTQKGISHAMIEGGSSIATAFLAADL 304
WP_080039160 206 EPEKVLQALYAAGARSLLVLGERGLAEQCAAAGLVDEVLVHLPDRASSSPGGDLPLAGFRISAVRRVQDHVLVQAQREDA 285
WP_084133894 197 HALDALHHDGTRTAGLAVDHVTAQPYLDTGLIDHIEAHSAHEAAHLPNLPDGYRLAQISHLNNGLRLSLSRNSTNAQTPS 276
WP_130109865 227 TILVGTGTLIADDPALTARAEHGGLLVPAQEQPVPVVMGHRPIPDGARVLQHPALAARGLASPLRLTGDDLTADLAELHA 306
WP_084253057 262 RTGALIVGTGTVIADNPALTARPKGMDLVHQPLRVVVGMRPVPREAAVRGHNGRFLQVPTDTPRDVIRVLEERGIEHAVL 341
2B3Z_A       294 EGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFA 325
WP_013287248 286 RLRRQRPSSA---------------------- 295
WP_084672881 286 LRLDARPQEQGQITDSGV-------------- 303
WP_052809189 356 AGLADELHAYIAPALLGAGAQAVSGLGISTIT 387
WP_046010302 289 QVDLKGLLVTLARQGINEILVESGAKLAGAFI 320
WP_071893282 305 VDEIWLYQAPKLLGSGISALKDLGISTLSEAL 336
WP_080039160 286 PFRAR--------------------------- 290
WP_084133894 277 PSSQR--------------------------- 281
WP_130109865 307 RGFRRLFVEGGPAIASSFIAAGLVDEILVYLA 338
WP_084253057 342 EGGPRLATAFWQAGLIDEIHAYLAPVYLGVGR 373
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