Conserved Protein Domain Family
YeaK

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cd04336: YeaK 
YeaK is an uncharacterized Echerichia coli protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, and ProX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express a single-domain INS homolog such as YbaK, ProX, or PrdX which supplies the function of INS in trans.
Statistics
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PSSM-Id: 239828
Aligned: 10 rows
Threshold Bit Score: 199.108
Created: 18-Aug-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative deacylase active site [active site]
Evidence:
  • Comment:A mutation of the conserved lysine to arginine in Haemophilus influenzae YbaK abolishes activity.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                 #                                      
P64484        11 HQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVkgng-vnqHVLAILAADQQADLSQLASHIGGL 89  Escherichia col...
NP_900835     83 FERLRKMLEAGDARFRVIEHPAEGNSHKVAEIRGTEVGQGAKAMLCRVada--pgqFVLAVLPGDERVDFAKVAAAVGAR 160 Chromobacterium...
AAY94424      19 FQRLVSLLDSHQARYRVIFHPAEGQSARVAEIRGTEPGQGAKAMLCSLkgt--devYGLVILSGDQKLDMKKVGAALGGK 96  Pseudomonas flu...
CAD91235      11 YERLIADLDAAGARYRLIDHAPEGRTEQVSALRGHDVAQAAKCLIVMVkigkkrtrHVLAVVPGDARLDLQAVKALLDGT 90  Nonomuraea sp. ...
YP_482485      8 FRRLTDLFESGSVSYRMIPHPPEGHTDVASRLRGHPLQQAAKSLVVRVatgrrsrrYVLAVVPGDRRVDLNALADRYGGR 87  Frankia sp. CcI3
CAJ49621      15 FQQLQNLLSAQAADFRLLRHPAAGKSVEVAAIRGTEVSQGAKALVCRVkisakqrkHVLAVFPADGQADLDAIALAAGGK 94  Bordetella aviu...
ZP_00979416    7 FDTLCELLNTSGARFRVLEHPAEGKSDAIAALRGTRPEQGAKAMLCTFkdg--gdtTALAVIPGHVKIDFRKVADAVGRR 84  Burkholderia ce...
CAK60329       8 FEAIQQLLNTNNIQFKLLIHEPTKTSEESAKVRGVSLDSGAKAMLLQNkkt---qlFILCVMSASKKLSWKLIRKLLDCK 84  Paramecium tetr...
XP_001021011  33 YSCDLVFKLLNGIKFTTLDHKPCKTSEESAQVRGVSLDSGAKAMLLKDkqn---itFILAVMSASKKLSWKLIRGIVGHK 109 Tetrahymena the...
ZP_01906383    3 LERIRELLTTHELPFCELHHPPTRTSRDSARERGEPLEIGGKALLIKVdd-----rFALFVLSAARRLDSKALRRSVGAR 77  Plesiocystis pa...
Feature 1                           ##                            #                           
P64484        90 RASLASPAEVDELT-GCVFGAIPPFSf-hPKLKLVADPLLFErFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFR 164 Escherichia coli O...
NP_900835    161 KVKLADAADAEAAT-GCVIGAIPPFSf-dPSIRLVADPQLLArYREIAFNAGRLDASIVLDGDDYRRLARPLLTDIR 235 Chromobacterium vi...
AAY94424      97 KAQLVSPELARELT-GCVIGAIAPLSf-dPRIRLIVDPQLTSrYSEIAFNAGRLDASMVLDTQDYLRVAQPLLLSVT 171 Pseudomonas fluore...
CAD91235      91 YVAFAGTEKAEELA-GSVSGTVLPFSy-dPRLELVADPSLLD-QPELYFNAARLDRSVALATADYVRLAAPRVAPIT 164 Nonomuraea sp. ATC...
YP_482485     88 EASFAAREVAERLA-GSVSGSITPFVf-sPELDLIVDEGLLI-HDEIYFNAGRLDLSVALSVSDYLVLARPTVAPIA 161 Frankia sp. CcI3
CAJ49621      95 KAALATHELARELT-GCEIGAIPPFSf-nTELHLIVDPSLRQrHDEIVFNAGRLDASIIMRTEDYFRIAQPELARFV 169 Bordetella avium 197N
ZP_00979416   85 KATLASPDVAAAVT-RCVMGAVPPFVf-dANVTLVVDPALVErNAEIAFNAGRLDRSVVLDAADYVRIARPLLVDIT 159 Burkholderia cenoc...
CAK60329      85 QLDLANEQQVYEVT-KCVTGAVPPFGs-iFKVQTYLDPSLITqGDQINFNCGLRTHSVAMSIQDYLKIENPIQLQFC 159 Paramecium tetraur...
XP_001021011 110 KLDLAKPEEVYSLT-KCIPGAVPPFGs-iWGIKTLTDQSLLDqGDVINFNCGLRTKSISMKTEDYLNVEKPQVCQFT 184 Tetrahymena thermo...
ZP_01906383   78 KSRFATPEELAALTgGLVPGSVPPFGepiLPFPLIADASVLA-NARIAFNAGSLTDSIVLATADWAKVARPRVLEFT 153 Plesiocystis pacif...

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