Conserved Protein Domain Family
trans_reg_YafC

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NF040888: trans_reg_YafC 
DNA-binding transcriptional regulator YafC
Statistics
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PSSM-Id: 468824
Aligned: 36 rows
Threshold Bit Score: 494.808
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_214067896      1 MKANSEELTIFVSVVESGSFSRAAEHLQLANSAVSRSIKKLEKKLGVSLLNRTTRQLSLTEEGQRYFRRVQHVLQEMAAA 80  Photorhabdus...
WP_066109758      1 MKTNSDELSIFVNVVESGSFSRAAENLNMANSVISRSIKRLEHKLGVNLLNRTTRHLSLTAEGERYFAKVRNILQDMADA 80  Gallibacteri...
WP_005674573      1 MKSHSDELAVFVQVVESGSFSRAAESLGLANSVVSRTVKRLEEKLSTNLLNRTTRQLRLTEEGSRFFRRARQILHDIDAA 80  Lautropia mi...
WP_002214623      1 MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAA 80  Neisseria
WP_022595440      1 MKTHSDELEIFVSVVEHSSFSRAAAQLNVANSIVSRAIKKLEKKLGVVLLNRTTRRIGLTEEGRWFYEQSKSILQSMKDA 80  Vibrio nigri...
WP_193000563      1 MKTHSDELALFVAVVEAGSFRQAAENLGLDNSVVSRGVKRLEQKLATVLLTRTTRSLSLTEEGEWFYQRAVKILTEMAEA 80  Aeromonas si...
2_ncbifamImport   1 TKVTIDELVLFNAIVANGSFSRAADSLNLAASVVSRSLKRLETKLGSSLLNRTTRNISLTQEGQWLFDRAAGIIAGINAI 80 
WP_127020969      1 MAGHTEQLDTFVTVVKTGSFTAAAEQLGQATSVVSRRVKQLEQRLGVALLVRTTRSLRLTSEGEWYYQQACSILRQLNQA 80  Rheinheimera...
WP_024870718      1 MSANSEELALFVAIVDAGSFRQAADNLGIDNAIVSRGLKKLEAKLATTLLNRTTRRFTLTEEGQWFYEEAAAILARMAHA 80  Tolumonas li...
WP_093501505      1 MKTSLDELLAFSTVVAAGSISAAAQQLGQTASGISRALSRLEEKLEVTLLQRTTRRLELTEEGQAFLLQARRIIASVEEA 80  Pseudomonas ...
WP_214067896     81 ETEIMESKHTPSGLLRIDAATPVVLHLLIPLIKPFRERYPEITLSLISSETYINLIERKVDIAIRAGNLTDSSLRARPLF 160 Photorhabdus...
WP_066109758     81 EAEMLETHQTPQGILRVDAATPVILHLISPWIEEFRQRYPQITLSLVSSETYINLIERKVDVAIRIGELKDSSLRSKLLF 160 Gallibacteri...
WP_005674573     81 EAELLSSGGTPQGILRVDSATPTLLHRIAPLVRPFRERYPKVSLQLTSSEGYIDLIERRVDIAIRAGSLHDSALRARHLF 160 Lautropia mi...
WP_002214623     81 ETEMLAVHEIPQGVLRVDSAMPMVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF 160 Neisseria
WP_022595440     81 ETHLQNLKSTPSGMLNIDSSSPFMLHVIVPMVSSFSERYPDIQLNLSSNESLVNLLERKVDVAIRIGELEDSSIRARKIG 160 Vibrio nigri...
WP_193000563     81 EGTLLMRREQPEGILRIDAATPFILHQLVPILGRFRERYPAIELQLNSSEGFINLMERRVDVAIRIGELGDSSLRAMPLG 160 Aeromonas si...
2_ncbifamImport  81 EAHFLEETGRPRGIVRVDAATPFTLHAIAPLIAGFNERYPDITVVLESSESTINLIERKVDIAVRIGELESSSLTARKIG 160
WP_127020969     81 DHFLMDRSHKPAGKLRVDSATPFILHQLVPLVAEFLALYPEIELTLDSSESFINLIEKRVDVAIRFGELTDSSLKARKLG 160 Rheinheimera...
WP_024870718     81 EAALLSRKATPEGILRIDAASPFILHQLVPLIGEFRQRYPLIELQLESSDGFINLLERRVDVAIRIGELTDSGLRALPLG 160 Tolumonas li...
WP_093501505     81 EEQMSMRRQTPAGRLRVNAAAPFVLHAVVPLIKGFRERYPNIELELHSSDQIIDLIEQRTDVAIRIGQLRDSTLHARPLG 160 Pseudomonas ...
WP_214067896    161 SSYRKIVASPEYLKKYGIPQCIDELKNHICLGFTEPVSLNTWPIACQDGQLHEITVGLSSNSGETLKQLCVTGNGIACLS 240 Photorhabdus...
WP_066109758    161 NSYRKVVAAPSYLQKYGVPQQISALAQHQCLGFTEPETLNIWTIA-EDHQPYQITPTITASSGETLRQLCLVGSGIACLS 239 Gallibacteri...
WP_005674573    161 DSRLKLVAAPDYLARYGTPESVADLSRHVLIGFSEPRTLNNWPFADSGHAPYAAAPQLSANSGETIRQLCLSGNGIACLS 240 Lautropia mi...
WP_002214623    161 DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIACLS 240 Neisseria
WP_022595440    161 ETTRYLVASSEYLQKYGYPKTVEDLDKHKCLGFLHPNHLNDWPLENGGEVSFCSQPTCKASSGEVIRQICLRGYGIACLS 240 Vibrio nigri...
WP_193000563    161 RSRLRVLAAPDYLKRHGTPRTPEDLAGHVLLGFISPDHLNHWPLLSREGDRLPVTPSLRASSGETLRQLALAGEGLVCLS 240 Aeromonas si...
2_ncbifamImport 161 DTYRGIYAAPGYIERRGVPGSAADLRDHCCLGFTKPEKLNTWPVLGPDKTPLAVTPAVLADSGESLRQLALQGNGIACLS 240
WP_127020969    161 AGFRRLLASPNYLASFGTPESLADLVKHRCIGFSSIEHLNRWPLRDHDGELYKITPYLTADSGETVRQLVLHGNGIACLS 240 Rheinheimera...
WP_024870718    161 CSRLRILASPDYVNRKGLPNSIDALSQHCLLGFSGAENLNLWPLHHEQGDWLQIKPMLKASSGETLRQLALAGEGITCLS 240 Tolumonas li...
WP_093501505    161 SSRRRVLASPAYLAEHGVPESVEALHQHSLLGFTQPESLNQWPLRHAQGDSFTIVPSLNASSGETLRQLALEGVGIVCLS 240 Pseudomonas ...
WP_214067896    241 DYMIDQEIVSGELIELLVEKRLPVGMPFNAVYYSDQAVSTRIRAFIDFLSEYI 293 Photorhabdus hainanensis
WP_066109758    240 DFQVDQDLAAGALIELFADKRIAVPMPVNAVYYSDRAVSTRIRAFIDFMAEKC 292 Gallibacterium salpingitidis
WP_005674573    241 DFVVASDIAAGDLHELLPDRALNEAKPFHAVYYGDTTVSPKIRAFVDFLAEHW 293 Lautropia mirabilis
WP_002214623    241 DFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEEL 293 Neisseria
WP_022595440    241 EFMVANDVLEGRLELVLAEHLKPNTMPIFAVYYGDQSISTRLRTFIDYLSDYF 293 Vibrio nigripulchritudo
WP_193000563    241 DFMTGPDRESGALVEVLARSNSGASRPINAVFYSDAQRDPRLRAWLDFLKSHL 293 Aeromonas simiae
2_ncbifamImport 241 AFTVRRDVKAGRLIPLLKNKLLDMPIPVSLVYYADNAASERVRSLIDYIAEH- 292
WP_127020969    241 GFMTQEDIRAGRLVPVLEHLREQVLMPVYAVYYSEGEANPRVRCFIDFLTQKL 293 Rheinheimera mangrovi
WP_024870718    241 DFMTGPDRQSGQLQELLTELNSGACRPINAVFYSDAQRNPRLRVWLDFLKEKL 293 Tolumonas lignilytica
WP_093501505    241 DFMTHLDLSRGSLVEILAEHTLEVRQPIHAVYYRNTALTSRITCFLDYLSSEL 293 Pseudomonas straminea
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