1JXH


Conserved Protein Domain Family
HMP-P_kinase

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TIGR00097: HMP-P_kinase 
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hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
This model represents a bifunctional enzyme, phosphomethylpyrimidine kinase (EC 2.7.4.7)/Hydroxymethylpyrimidine kinase (EC 2.7.1.49), the ThiD/J protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Statistics
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PSSM-Id: 272904
Aligned: 14 rows
Threshold Bit Score: 308.452
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JXH_A        28 ALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETD 107 Salmonella ente...
P76422         6 ALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETD 85  Escherichia col...
O85786         6 ALTIAGSDSGGGAGIQADLRTFAFHQVHGTCAITCVTAQNTLGVTRVDAIAPAGVAAQLDAVLSDLPPQALKTGMLLNAE 85  Synechococcus e...
WP_002858043  11 VLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVLSVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCE 90  Campylobacter j...
WP_010966376   7 ILTIAGSDCSGGAGIQADIKTITAHKMYAMSAITALTAQNTTGVYGIMEATPEFVEKQLECIFTDICPDAVKIGMVSSGE 86  Clostridium ace...
WP_010901689   5 altvagsdsgggagIQADLKTFNALSVFGMSVIVALTAQNSYEVSGILPVPPDFVKLQFETVAKDIKVDGSKTGMLFSSD 84  Thermoplasma ac...
AAC31298      35 VLTVAGSDSGAGAGIQADIKVCAARGVYCASVKTAVKAKNTRAVQSVHLLPPDSVSEQLKSVLSDFEVDVVKTGMLPSPE 114 rape
WP_010868207   7 ALTIAGSDSGGGAGIEADLKTFTAFGVHGLVAITSVTAQNTQAVTAIHDIPPDVVSEQIRAVAEDIGVDAAKTGMLSNAE 86  Pyrococcus abyssi
WP_010876253   3 ALSIAGFDPSGGAGILADIKTFSALGVYGAGVITALTAQNVGRVSGIMPVPPGFVEEQLDLVMEDLPVVHAKTGMLYSAE 82  Methanothermoba...
WP_010897600   7 ALTIAGSDSGGGAGIQADIKTFQELDTFGMSVITALTAQNTLGVHGVYPQTLDAIEAQLDAVLSDIGADAVKTGMLFSAD 86  Bacillus halodu...
1JXH_A       108 IVEAVAERLQRHHVR-NVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDaPH-ARTEQEMLAQGR 185 Salmonella ente...
P76422        86 IVEAVAERLQRYQIQ-NVVLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDaPH-ARTEQEMLEQGR 163 Escherichia col...
O85786        86 IMEVVAGTI--APLFiPRIIDPVMVSRTGAVLIDQAAIAVLRDHLLPLATVLTPNRYEAQLLAG-MD-IQDAADLDRAAR 161 Synechococcus e...
WP_002858043  91 LMSCVAKNLSEFKPQ-NIVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCG-FK-IANEEQMIKAAK 167 Campylobacter j...
WP_010966376  87 IINVIVKKLREYKAE-NIVIDPVMVATSGSKLLSDQAMEKLITCLLPLGTLITPNIPEAEVLCG-FK-IKSEQDMVRAAK 163 Clostridium ace...
WP_010901689  85 IISVVAREFTEFGVP-VIVVDPVMVSKSNARLLKEDAIETLKEKLLPISTMVTPNVPEAEILSG-IK-IRNIEDMHSAAE 161 Thermoplasma ac...
AAC31298     115 IVEVLLQNLSEYPVR-ALVVDPVMVSTSGHVLAGSSILSIFRERLLPLADIITPNVKEASALLGgVR-IQTVAEMRSAAK 192 rape
WP_010868207  87 IIKAVAKTVKNYDF--PLVVDPVMIAKSGAPLLREDAVDALIKYILPLATLVTPNRFEAEKLSG-MK-IRTVEDAKIAAK 162 Pyrococcus abyssi
WP_010876253  83 IVEAVAEKVREYGLR--VIVDPVMVAASGGELSEGNFVRALRRHLLPEALIVTPNVAEAERLSD-IP-IGTVDDAIRAAR 158 Methanothermoba...
WP_010897600  87 IITLVAQKLTAYRVN-HIVVDPVMIAKGGAALLLDEAVEALVKKLLPIATVITPNLPEAAKILG-IEsIDSRTEMEQAVK 164 Bacillus halodu...
1JXH_A       186 ALL-AMGCEAVLMKGGHLEDAq-SPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLS 263 Salmonella ente...
P76422       164 SLL-AMGCGAVLMKGGHLDDEq-SPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSWLS 241 Escherichia col...
O85786       162 IIR-DLGPQAVLIKGGAATGDwhGVDWWWDGQQSHILKTEAIATPHTHGSGCTLAAAIAANAALGLEILAAAQAAKHYVT 240 Synechococcus e...
WP_002858043 168 HLC-SLGAKAVLLKGGHSEIN--ANDVFYDGKEIYILKGERIETKNTHGTGCTLSSAIASNLAKGKDLFHAVSEAKEYVR 244 Campylobacter j...
WP_010966376 164 KIS-EKINVGILIKGGHLVDN--ATDLFYKNGYIEWFKLEKIDNPNTHGTGCTLSSAIACNLAQGISISESIKNAKEYLT 240 Clostridium ace...
WP_010901689 162 KLYdETGSH-ILIKGGHLE-Ss-PIDVLYDGSSFHEFPGSRINTKNTHGTGDTLSSAIVSYMIRGHSESESVRLAKEYVE 238 Thermoplasma ac...
AAC31298     193 SLH-QMGPRFVLVKGGDLPDSsdSVDVYFDGNEFHELHSPRIATRNTHGTGCTLASCIAAELAKGSNMLSAVKVAKRFVD 271 rape
WP_010868207 163 KIAeETGAKAVIVKGGHIEGEe-AIDVLYHNGSYRLYRAPKVEGC-THGTGCSFSAAITANLAKGFGLEDAIEVAKKFIT 240 Pyrococcus abyssi
WP_010876253 159 VIG-ELC--DVIITGGHLGG----RSVILIDGDVEVLEGKLLDSRNTHGSGCSFSAATAAYLERGLDLGEALRMADDFVR 231 Methanothermoba...
WP_010897600 165 ELH-ALGPRYVVLKGGHLSGDe-ATDLLYDGETIHVFSSSRFDTKHTHGTGCTFAAAIAAELAKGASVFDAVKTAKAFIS 242 Bacillus halodu...
1JXH_A       264 AALAQAdtLEVGKG-IGPVHHF 284 Salmonella enterica subsp. enterica serovar Typhimurium
P76422       242 SALAQAdtLEVGHG-IGPVHHF 262 Escherichia coli K-12
O85786       241 KALRHS--LAIGQG-QGPLGHF 259 Synechococcus elongatus PCC 7942
WP_002858043 245 NAIYYS--LNLGKG-CGPTNHF 263 Campylobacter jejuni
WP_010966376 241 GALRAG--LDLGKG-SGPLEHT 259 Clostridium acetobutylicum
WP_010901689 239 GAIKNS--FTTGKG-YGSLCHW 257 Thermoplasma acidophilum
AAC31298     272 SALNYSkdIVIGSGmQGPFDHF 293 rape
WP_010868207 241 LGIAMG--HRIGHG-HCPVNQs 259 Pyrococcus abyssi
WP_010876253 232 EAIRHG--H------HGTLNQF 245 Methanothermobacter thermautotrophicus
WP_010897600 243 TAIKHA--VAIGGG-IGPTNHH 261 Bacillus halodurans
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