Conserved Protein Domain Family
lmo0850_fam

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NF040845: lmo0850_fam 
Lmo0850 family protein
This family of small proteins, averaging about 45 amino acids in length, occurs widely in Gram-positive genera such as Staphylococcus, Listeria, and Bacillus. The function is unknown, but the sRNA LhrA sRNA regulates expression of Lmo0850 in Listeria monocytogenes by negatively regulating the stability of its mRNA. The regulation depends on Hfq and involves an antisense interaction.
Statistics
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PSSM-Id: 468784
Aligned: 55 rows
Threshold Bit Score: 37.3428
Created: 11-Oct-2024
Updated: 3-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_002461206  2 KQVDKIQNMVKYLTSLGVNIKKTKSRLDIMNTLP 35  Staphylococcus
WP_165980593  3 QSQEKIKSVVTLLSSLGVNISKTKSRLEVMRTLP 36  Macrococcoides caseolyticum
WP_229713250  3 NKQDKMKNVVTLLSTLGVNITRTKSRLDVIRTLP 36  Macrococcus
WP_020007225  4 KDNSKVRQVVTMLNELGVKVQVSRSRFDMMNRIA 37  Salinicoccus albus
WP_176754154  4 IDNTKVKQVVTLLNELGVKVKVSSSRFDIMNRIA 37  Lacicoccus qingdaonensis
WP_162842296  4 NDKNKVKEVVQLLHELGVKVTVSKSRFEIMNRIA 37  Jeotgalicoccus halotolerans
WP_170156377  4 NDHSKVKQVVTMLSELGVKVKVSKSRFEIMNRIA 37  Salinicoccus roseus
WP_168161304  4 NDTSKLKDAVRVLKELGIKVSVAPSRLEIMNRIS 37  Nosocomiicoccus
WP_186076283  3 NDNSKIKEVVEILRELGVRVSITPSRIELMKRIS 36  Phocicoccus pinnipedialis
WP_180366263  4 QSNSKVEAIVEILKELGVKVSVTKSKFEMVNAIT 37  Aliicoccus persicus
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