Conserved Protein Domain Family
NinG

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pfam05766: NinG 
Bacteriophage Lambda NinG protein
NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.
Statistics
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PSSM-Id: 428621
Aligned: 6 rows
Threshold Bit Score: 256.335
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8ZMY3           2 AKLPRRKCAnkECRQWFHPIREGQIVCSYQCASAV---GKEQTRKAReAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLK 78  Salmonella en...
LANL:CH62_2528   3 KLPKNRNCK--VCKTRFKPETVYQWWCDEEHKEEY---IKQLALKARqNRIQKTEQRRREETQAERRSLKIRKLAVKPLS 77 
P03770           3 AKPARRRCKndECREWFHPAFANQWWCSPECGTKIaleRRSKEREK---AEKAAEKKRRREEQKQKDKLKIRKLALKPRS 79  Escherichia v...
CAL62424         9 AKPKLILCK--VCKVNRV-AKAMATVCGYECA-----------LKK---VELDNLKKAAKREQEERAAHRVKKQAAKKHG 71 
jgi:HSM_0891     3 KKVRSKKCK--VCGNAFKTNDSFRRWCSPECG---------VKLAQM-ALVKSQEKEKIKREKEERAKIKAVKERLKSRS 70 
AJA73274         4 KPPKQHKCK--ECGSYYIKFQSTQQVCSVKCA---------MAMGK-----RKTEAKRKKSAKIDRLEQRKRLEKLKSRR 67 
Q8ZMY3          79 HWIDLTQRAVNDICR-ETELaeGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTAL 157 Salmonella en...
LANL:CH62_2528  78 YFAKQAQQAFNEYIR-TRDA--GDACVSCGRFHEGQYHAGHYLTVGANPELRFNEDNCHRQCAPCNNHLSGNIEKYTPNL 154
P03770          80 YWIKQAQQAVNAFIR-ERDR--DLPCISCGTLTSAQWDAGHYRTTAAAPQLRFNERNIHKQCVVCNQHKSGNLVPYRVEL 156 Escherichia v...
CAL62424        72 EWEGDLQKLVNKWVRvVRDV--NEPCISCGTTKTVQWEAGHYIAVGANNTLRFVLDNIHKQCHRCNVQLSSNAIMYRVAL 149
jgi:HSM_0891    71 ERLKELQGVFNRFIR-LRDK--NLPCISCGRYHQGQWHAGHYRSVGACPELRFNEDNVHKQCSVCNNHKSGNVIEYRINL 147
AJA73274        68 DFEKDLQKIFNKFIR-LRDK--DLPCISCGRYHQGKYDAGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNL 144
Q8ZMY3         158 VERYGEAAVLALE-NNNTPHRWTVEELKEIRLAALADLRALKKl-E 201 Salmonella enterica subsp. enterica serovar Typ...
LANL:CH62_2528 155 IAKIGQVRFDILM-GPHEMTNYRRDDYIRIRDEYRAKTKALKKlrE 199
P03770         157 ISRIGQEAVDEIE-SNHNRHRWTIEECKAIKAEYQQKLKDLRNsrs 201 Escherichia virus Lambda
CAL62424       150 VKKIGVERVEWLE-GPHATNKISIPELQAEIARYKGLIKLADK--E 192
jgi:HSM_0891   148 VAKIGVERVEFLErKDHLPLKLADDEIKTLIQVYKAKVRELQDaq- 192
AJA73274       145 IEKIGLERVEFLErKDHPPLKLTIEQIKDLIKVYKAKCKELERvt- 189
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