Conserved Protein Domain Family
DUF4128

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pfam13554: DUF4128 
Bacteriophage related domain of unknown function
The three-dimensional structure of NP_888769.1, PDB:2L25, reveals a tail terminator protein gpU fold, which suggests that the protein could have a bacteriophage origin.
Statistics
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PSSM-Id: 433303
Aligned: 15 rows
Threshold Bit Score: 105.14
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
PRJNA194094:J421_4592  11 ALRAALGARL-DAALQAstlgalagcAVQSEGLR-FTRPTGR----PWIRGTLRVGGTVPDTIG--PHARLTTVGLWLVD 82 
jgi:Mnod_5060           5 TVMAAVKARLdETWTRC---------PVVYPNTKgNTPKDGS----RYLAVSYPLASSQPITVGspGSTLYRETGTFRLV 71 
jgi:Mnod_4071           5 TVMAAVKARLdETWTRC---------PVVYPNTKgTTPKDGS----RYLAVSYPLASSEPITVGspGSTVYRETGTFRLV 71 
Q1GIH2                  7 DIHAALMAQA-ETItg---------yAMLWPQKG-GDQPIGE-----HIRVSHVPNDNAPADLS---SDVMERQGFLYLT 67  Rueger...
jgi:Daci_4088           8 SIWLALKSRI-DTLPLa--------yPRAWPGQT-FQVPSSGglpqPYLRVGRVSADPVRLFLG--DGEPHRRTGSLMVT 75 
WP_013331839            2 TYQALVAALIkHALAWGgp------ePMEIPNVP-AQQHTDN-----WLRVNVVPGDTITAEVG--GKPCPRMTGLVMIQ 67  Halomo...
jgi:Msip34_1621         5 NIRKAFEKRL-LALDta--------fATAWPNVE-FDPVLGV----PYQKPSLLPAAPENPTLG---DGYYREVGVFQVL 67 
Q7VTX6                  5 LIRAAFEKRL-KDWAKArtp----elAVAWQNIN-FTPPSNA----VYLRAYVLPAATISRDAA---GDHRQYRSLFQVN 71  Bordet...
LANL:CH61_2045          5 RITALLEKRL-GEWAAIkg------iPLAAENVS-FDDTGTM-----YLQSHVMPATTDAIDLA---QVSRVFRGVYQIN 68 
jgi:Mnod_6234           9 QVLDALLGYL-AGLTFDpa------lPVAQPGVA-FAPQTGK----PYLAASFHPNTAGLDGLP--FDSDRTHVGLFVLT 74 
PRJNA194094:J421_4592  83 VFTPANTGTADSDTLADAVVLAFppgldlalpnaqAADGVLRLTGASRGGAIPDA----AGWLMAPCTVSW 149
jgi:Mnod_5060          72 LHVERGVGVDEGAAWMDELAAHF------------RGLTVGHFRCYGPTSPAHDDrndlGNYYALSISVPY 130
jgi:Mnod_4071          72 LHLERGLGVDEGSAWMDELAALF------------RGLTVGHFRCYGPTSPAHDDrndlGNYYALSISVPY 130
Q1GIH2                 68 LVSDLGQYEAVTKRKAGEIAAYFkrgq-----rltSNGTTVKITGH-TVRPGRQE----GGRWETPIRISY 128 Ruegeria sp. TM...
jgi:Daci_4088          76 LVHPLGQAVAVYDQIAAGIAAHFvdgt-----emaYGDLVITVRDYPHVQEGYED----TGYWSVPVRIPW 137
WP_013331839           68 IFTKLEEGWGAAYDIATRIGEHM---------------AYQSIGDIDTLAYTPQDfgemNGWYQVNVSIPY 123 Halomonas elongata
jgi:Msip34_1621        68 LYYPLGDGPDNADLKALAIKNHFpral-----kmtEAGQVIQVMLTPTIAPGFES----MERWCIPISINY 129
Q7VTX6                 72 VVMPIGAGSRAAEQIQAELDALFqvnl-----impSGGLAVRVRTPISSGQPTTG----DADHTVPISLGY 133 Bordetella pert...
LANL:CH61_2045         69 INVKAGGGKSKSHIIAAELIELFnlnt-----eltDGVVTCYINSVPSQFPSITN----GISYTTPISMSY 130
jgi:Mnod_6234          75 VVWPTGQGLLKPLDVAAQVRRAFpagt-----rlwRNNLVVCVDEVPQVDAPIDE----APWVRIAVTIRW 136
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