Conserved Protein Domain Family
SCFA_trans

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pfam02667: SCFA_trans 
Short chain fatty acid transporter
This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.
Statistics
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PSSM-Id: 280776
Aligned: 4 rows
Threshold Bit Score: 615.284
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O28734   8 ALERMGARLCASVEKWMPDPLIFALLLTLVTYLLVIVVMKPYTVMdagtmvkwlLVDVWYKGFWGLLSFAMQMCLILVTG 87  Archaeoglobus fulgidus
O25400   3 LLRHLTSACVFLASKCLPDSFVLVALLSFVVFVLVYCLTGQDAFS---------VISSWGNGAWTLLGFSMQMALILVLG 73  Helicobacter pylori
P76460   1 MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPIS---------MVKMWGDGFWNLLAFGMQMALIIVTG 71  Escherichia coli K-12
P44051   1 MISRVSRFMTTFVSKYLPDPLIFAVLLTFVTFICAWGLTDSTPVD---------LVNMWGNGFWNLLGFGMQMALIVVTG 71  Haemophilus influenza...
O28734  88 YAIAYHPIVYRILKKIATLPSDTKSAAALTALIAMIAAWINWGLGLIVGAILARtigiEFYRTGKPLHYPAVVAAGYAGL 167 Archaeoglobus fulgidus
O25400  74 QALANAKLVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLVISAIFAK----EIAKNVKGVDYRLLIASAYSGF 149 Helicobacter pylori
P76460  72 HALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAR----EVARRVPGSDYPLLIACAYIGF 147 Escherichia coli K-12
P44051  72 NALATSPQIRKFLSTIASIAKTPAQGVVLVTFMGSIACIINWGFGLVVGAMFAK----EVARRIKGSDYALLIACAYIAF 147 Haemophilus influenza...
O28734 168 gLTWHWGLSASAPLLINTPNHFLKDVFVElFG-RETVPLNETIFHPYTLINLAIIISFGVLAYYALAPNRGELKGIDKva 246 Archaeoglobus fulgidus
O25400 150 -VIWHGGLSGSIPLSVATQNENLSKISAG-VI-EKAIPISQTIFSSYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDS-- 224 Helicobacter pylori
P76460 148 -LTWGGGFSGSMPLLAATPGNPVEHIAG-------LIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDP-- 217 Escherichia coli K-12
P44051 148 -MTWGGGFSGSMPLLAATPGNPVAHLMMSeSNpQGIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDP-- 224 Haemophilus influenza...
O28734 247 phiiELVKKEKEEELKEKSKERVTIADKLENSKVLALLISILGIITMGYWFYEKGFfggLNLNSLNFTFIMVGLLLYMNP 326 Archaeoglobus fulgidus
O25400 225 ----KLLKDEYKEIELISHQQDKTIAHFLENSALLSYLLVFLGFGYLGVYFFKGGG---ISLNIVNTIFLFLGILLHKTP 297 Helicobacter pylori
P76460 218 ----KLLMEEADFQKQLP--KDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFn--ITINTVNLMFMIAGLLLHKTP 289 Escherichia coli K-12
P44051 225 ----KLIAPDPTFDKKLD--KDATLAEKMEESRFLAYTIGALGYSYLGMYFYKNGFn--LTINNVNLIFLITGIVLHGSP 296 Haemophilus influenza...
O28734 327 IAYMRAITRAAGAVAGILVQFPFYAGIMGMMRYSAvvAGGPNLATVIANSIASVATPFTWPAICLYIAGLINIFIPSGGG 406 Archaeoglobus fulgidus
O25400 298 LAYVKAIDRSARSVAGILLQFPFYAGIMGMMASHS--VGGHSLAQMLSLAFTHIANEKTFVLMTFLSAGIVNIFIPSGGG 375 Helicobacter pylori
P76460 290 MAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSG--LGG-----LITEFFINVANKDTFPVMTFFSSALINFAVPSGGG 362 Escherichia coli K-12
P44051 297 MAYMRAIINATRSTAGILVQFPFYAGVQLMMEHSG--LGG-----LITEFFINVANKDSFPLLTFFSSAFINFAVPSGGG 369 Haemophilus influenza...
O28734 407 EWAAVGEILARTSAALGVPIGKTVIAYGVGDAWTNLFQPFWAIPLLGLTGTRARDVFGYTISVMILATIPLSLGLVLV 484 Archaeoglobus fulgidus
O25400 376 QWAIQAPIMLPAGQSLGVDPGVVSMAIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFL 453 Helicobacter pylori
P76460 363 HWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF 440 Escherichia coli K-12
P44051 370 HWVIQGPFVIPAAQALGADLGKSTMAIAYGEQWMNMAQPFWALPALGIAGLGVRDIMGFCMTALIFTAPIFIIGLYFL 447 Haemophilus influenzae ...
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