Conserved Protein Domain Family
SgrR

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COG4533: SgrR 
DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a periplasmic-type solute-binding domain [Transcription]
Statistics
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PSSM-Id: 443600
Aligned: 57 rows
Threshold Bit Score: 571.833
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_045109516   5 LNNDKKMLYFSRLSKLGVKQEIAITLHEVAEVTFTSSRHCRTLLNEMRDLRWLEWTPKAGRNQRSRLYLIYAVDELKAEL 84 
YP_001007308   1 MRIIHRLTQYQRLFQKFGENLASTTVSEVASLLFCSERHTRTLIQQLQANGWLSWHSQVGRGKRAQLQCLKSPDTLRATY 80 
WP_015870478   1 MRLLQRLNQYQRLYQFAGDVPVSATVAELAAIICCSDRHVRTLLGQLQEAGWIRWQASAGRGRRGSLRCLLPVSQLRHQL 80 
WP_013576632   1 MRLQNRLNQFQRLYLKTGQVPVQFTVAELAEIFCCSERHTRTLLKHFQDAGWIDWQSQAGRGKRASLCCLKTPEELRGAC 80 
WP_002444599   1 MRLLNRLNQFQRLWQPSRGEPQQVTIPELAGRCFCSERHIRTLLHQLAERGWLSWQAAPGRGRRGVLRFLTTPDAVRASM 80 
WP_025301771   1 MRLVHRLSQYQRLYHQLGSAPVAVTIGELAAMFYCSERHARTLVQQLQDQGWLSWHSQPGRGKRARLHCLKTPDELRAQL 80 
WP_025799975   1 MRLLQRLSQYQRLNQFAGDDPIQTTVAELAGVFCCSERHVRTLLAQLQALKWLEWHATAGRGKRARLHCVIPEQQLRANL 80 
WP_029039631   1 MRLLNRLNQFQRLWQPSEGAPQAVTISELAVRCFCSERHMRTLLRQLEQHGWLRWRAQSGRGKRGELIFLVSPHTVRAGM 80 
WP_095845595   1 MRIVHRLCQYQRLFQQFGTTPASVTVSNVAAILYCSERHARTLVQQLQAQGWLSWQAQAGRGKRAQLQCLKTPDELRAGH 80 
WP_121814213   1 MRLLNRLNQFQRLWQPSAGEIQHVTVADLAARCFCSERHVRTLLNQLQDAGWLTWEAKSGRGKRGTLTFLVTPESVRSGM 80 
WP_045109516  85 AQQMIAVGKYEKALALIDHDQLLFGLLLQNTSGAVQREGRLHIQLTYARSFSALLPHIALRNSERFLLRQVYCCLVQCD- 163
YP_001007308  81 MQAFLEQGDHQAALELAQLEPERLQALLNPHMGGQWQADSPVLRIPYYRMLEPLNPLTATGRAEQHLIYTLHAGLTRFNt 160
WP_015870478  81 MEHLLREGNHQGALRLAARDPAQLTPYLQPHLGGHWQAELPTLRIPYYRPLEPIHPLQLSGRAEQHLAHTLHAGLTRFVp 160
WP_013576632  81 LQELLKNGEHSAALQLSQLDPSHLNALLAPHLGGQWQEDAPTLRIPYYRPLQPLDPLTLTGRAEQHLAHTIHAGLTRFIp 160
WP_002444599  81 MESVLNKGQQQNALELAQLAPEQLRQALQPFLGGQWQNDIPTVRIPYYRPLEPLLPGFLPGRAEQHLSSQVFSGLTRFCq 160
WP_025301771  81 LQQLLQQGNHQGALEMAQLDPQHLQDLLSPHLGGQWQAGSPTLRIPYYRTLEALDPLTLTGRAEQHLVSTLHAGLTRLMt 160
WP_025799975  81 MQQLLNAGDHQNALKLAERDPIHLNELLMPHLGGQWDSDLPTLRIPYYRTLEPIAPLALTGRAEQHLAHTIHAGLTRFEt 160
WP_029039631  81 METVLSQGQTHNALALAQLASGQLRQLLHPFLGGQWHNDTPTLRIPYYRPLEPLKPGFLPGRAEQHLARQIFSGLTRFNp 160
WP_095845595  81 LQRLLQTGDHQGALMMAQLAPQHLQDLLSPYLGGQWQAGSPTLRIPYYRRLEALDPLTLTGRAEQHLVSTLFAGLTRFNt 160
WP_121814213  81 MEQVLHKGQHQNALELAQIAPEQLRHLLQPFLGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFAGLTRFTs 160
WP_045109516 164 KNGVISPQLAHHWVYNAELQRWRFYLRPALTFHDGSTINADKIAELFNRLKRLATYKTELAHVIHISAINPLCIDFQLDQ 243
YP_001007308 161 GCPQPQPDLAHHWQVSDDGLTWQFFLRSQLRWHNGERLHGQQLLQTLKLLRANTRSQPSFTNILTITLPHALCLQFTLSQ 240
WP_015870478 161 GSTAPQPDLAHHWQISADGLCWQFLLHNNLRWHHGQPIGAGQLLETLRALCIHPQASALLASVAAIDRPHPLCLRFTLHS 240
WP_013576632 161 GNSAPRPDLAHHWQISNNGKTWQFFLRSQLFWHNGEPLKTAQLMARFEQLQNSPRSKHNLACVSKLSQPHALCLQFDLDK 240
WP_002444599 161 GSARPVGDLAHHWEITDDGRCYAFWLRPSLYWHQGEKVTAAHLVESLTQLCDDPQVGRLFASIAGLEAPAPGLVRIRLHR 240
WP_025301771 161 GNPEPQPDLAHHWQIDDRGLRWRFFLRSQLRWHNGEPLTGHQLLQTLEKLQRHPRSQPSLANVANISLPHPLCIQFDLQL 240
WP_025799975 161 GNPHPQPDLAHHWQISADGLKWQFLLRSDLRWHNGQPITAEQLVQRLKQLRHHPRCGSFLSSIADISLPHALCIRFTLKC 240
WP_029039631 161 DTARPEGDLAHHWRVSPDGLSWWFYLRPTLHWHNHEPIDAWQLRQRLQQLFELETLRQLFASVREITVEHKHCLRVELTR 240
WP_095845595 161 GNAEPVPDLAHHWQIDRDGLRWRFFLRSQLRWHNGENLTGQQLLQTLEKLRHHPRSRANLHSVAAITLPHALCLQFDLHT 240
WP_121814213 161 SGTLPQPDLAHHWEVSEDGLNWNFFIRSTLHWHNGEPVESTQLQQRLMMLLALPAMRHLFVSVKSIELAHTQCIRFVLHS 240
WP_045109516 244 PDPGFAGLVADVKYSIQPYSQlnattAIVGSGAFKVQEHTQQYLRLQAYDNYYGHRALTDTVTIWQVASPQISPScirei 323
YP_001007308 241 PDYWLAHRLADLPCRLFHPDH-----PLLGAGPFKLATFEQHLVRLEQHEFYHLQHPYLEIIEYWITPNLMVQSTd---- 311
WP_015870478 241 PDYWLAHRLANLLCLLPHPQL-----PDIGAGPFRLVSASPTLLRLEQYEGYHLRRPYLHAIEYWITAG--AGTAl---- 309
WP_013576632 241 PDYWLAHRFADLNCLLSHPDN-----PHIGAGPFRLTTFSPELIRLEQHTLYALQHPYLAAIEFWITPQLFAQKSn---- 311
WP_002444599 241 PDYWLPWRLACYYSQLHYPGE-----PHTGCGPFKIAQFSPELIRLALHERYHLTHPLIGAVEYWITPQLFDARLg---- 311
WP_025301771 241 PDYWLAHRLAELPCLMTHPEL-----PAIGAGPFKLTLNEPQLVRLEQHAGYHLQHPYLDTIEYWITPDLPTAGAd---- 311
WP_025799975 241 ADYWLAHRLADLLCLLPHPDY-----PEIGAGPFRQISSSDMLIRLEQHSSYHLHRPYLHAIEYWITSNPEQASAa---- 311
WP_029039631 241 PDHWLAWRLASHGCYLAHPDD-----TTIGSGPFRLATFTPELVRIESHDRCHLGHPLLNAVEYWITPGLFDSALg---- 311
WP_095845595 241 PDYWLAHRLAEYPCLIPHPQD-----PTLGAGPFKLALNEPHLIRLEQHPFYHLQHPYLERIEYWITPE---QPGg---- 308
WP_121814213 241 PDYWLAHRLASYCSRLAHPED-----DQIGCGPFRISSYKESLVRIESFESYHLGHPLLKAVEYWITPQLFDTELg---- 311
WP_045109516 324 qanvvhktsqirsnYAISSLERdinslEQENspeqeigslqqgtssnDQAI-ESDQKSRIEYGCLLAMINNKTQ--LSLL 400
YP_001007308 312 -------------gSCQHPVRIt---iGQEE----------------DFPL-ARPVQRSMSLGFCYLAVNQHRSnmTSQQ 358
WP_015870478 310 -------------pSCQRAVRIq---iQQHD----------------EGAQdTRRLKSSTSLGFGYMAVNLRQGrlSPRQ 357
WP_013576632 312 -------------vSCQHPVRIi---lGEQD----------------ELSR-VKPVRRSTSLGFCYIAANLKRGvlNEAQ 358
WP_002444599 312 -------------tSCRHPVQIa---iGEQA----------------QLTS-LRPIDNRLSLGFCYLAIK-QQGrlSARQ 357
WP_025301771 312 -------------aSCQHPVRIt---iGQQD----------------DLAQ-ARPVQRSMSLGWCYLALNLRHGvlSEAQ 358
WP_025799975 312 -------------pSSQHPVKIt---iGQYE----------------ELDS-VRPVQRSTSVGFCYIALNQKRGklTVAQ 358
WP_029039631 312 -------------tSCRHPVQIa---iGQQE----------------ELVH-LRPVSNSISLGFCYLGIR-QNGqlSHAQ 357
WP_095845595 309 -------------aNCHYPVRIt---iGQQE----------------DLAQ-ARPVQRSLSPGWCYLALNLQRAtlSEAQ 355
WP_121814213 312 -------------tSCRHPVQIa---iGQQD----------------ELVH-LRPVSNSISLGFCYLAVK-QNSnlSPEQ 357
WP_045109516 401 QRKyLSQLLAADKLMAELSKSTNPieAIPAYNLLSNWLKITSTGTTAQPLPSKLTIAIFEHHTLKECAQAMTVLLEQAGF 480
YP_001007308 359 LAR-LLMLVQTSGILEELSIRRGI--ITPSHEMLPGWPIPRFASDNDSPLPVHLILIYQPPMELKSVAEQLKVVLAAQGC 435
WP_015870478 358 ARD-LLGLMREGQTFSALSLEEGI--TLRCEELLPGWAIPAF-TGPPGPLPPRLTLLSYPASALHQLARRLQSRLAACGC 433
WP_013576632 359 ARK-IVRLIQRSGMLDNLPIDHDL--VKASKEMLPGWPIPLH-DDADVPLPEKLTLLFHPPVEFELVAQALKEKLAEEDC 434
WP_002444599 358 AKW-LMHLIHQSGLLTTLPVEDGL--IQPSRELLPGWPLPDSRHCEPTPLPATLTLLYHLPVELHAMASQLVSHLARYGC 434
WP_025301771 359 GQK-LLMLIQQSGLLNHLPIPNSV--ITPSHEMLPGWRIPSQQIEEDVPLPARLTLLYRPPVELETVTVALQQLLAQHGC 435
WP_025799975 359 RRY-LTTLIREENTLNHLPIENGL--IARSSAMLSGWPLPDP-TPEPISLPSKLTLLYHPPAELTALSDRLQERLAQAGC 434
WP_029039631 358 ARW-LMQRVHRSGMIDSLPLDEHL--ITPSSELLPGWHLPQWPDEPPPPLPPSLTLVYHLPVELPVMARQLQHELAQRGC 434
WP_095845595 356 GKK-LLMLIQQSGLLNNLPIPNGV--ITPCQEMLPGWQIPRHIADETVTLPRRLVLLYRPPMELEAVTLALQRLLAQHGC 432
WP_121814213 358 ARF-LMQVIHQQQLIASLPVDESL--IMPSVEMIPGWKIPEWTQCDAIALPPQLTLLYHLPVELHVMAQQLKTSLAALGC 434
WP_045109516 481 ECEINVYSFEELLqkASANTLMEDLILISLDLDDNLPTSVFHWMLSNAVLNHSLSVDARDWLQTKLINIRQQQPLTHYLT 560
YP_001007308 436 TLEIRSSHDKQWK--DSHQIEKADLLLADHLVGESPEAAMESWLRLDPLWRGILSPSQWEQQQKTLTHIQQIELDSERHH 513
WP_015870478 434 ALTLQLISGKRWS--DDAQLAQADIILGDKRIGESPGATLDNWPRTDRLWQAILPPNAYADTLARLNLQRQVSAEAQRLA 511
WP_013576632 435 ALEVKYHAGRLWE--DDALLGWADLLLGDRLIGESPDASLENWLQQDPLWPGILREKDYVCQQQRLAAIQQIPLENHRSD 512
WP_002444599 435 TLTLRFHDAKNWS--GCPDMDTADILMGDRLIDEAAEYTLEQWLRSDVLWQAVFSPPRYRQLLHQLDEIQQQSSPAQRIA 512
WP_025301771 436 ELEVRYYAGKRWQ--SEEQIAQADLLLADNLIGEAPEATLESWLRQDTLWRGILTESRWQQQQETLQQIQQLQAQQPRFE 513
WP_025799975 435 ELEVRFYDGKRWE--SNEQFADVDIILGDRLIGESPEVALENWLRIDVLWQAILSDKEQQQCRTVLDGVQQLADETQRHH 512
WP_029039631 435 TLTLHFHNAKNWD--GCTQLAQADIVMGDRLIGEAPEYTLEQWLRCDPLWRHLLTGPQRAHLEATLDAVQSHPDEQSRHA 512
WP_095845595 433 TLEIHYFAGKRWQ--SEEQVAQADLLLADRLIGEAPEASLESWLQQDVLWRGILPTARWRHQRQTLRRIQQQPAPTARFH 510
WP_121814213 435 ELTLVFHDAKNWT--GCDALAEADLMMGDRLIGEAPVYTLEQWLRSDVLWPAVLTENQYTHLQATLDTVQIHPDENARNT 512
WP_045109516 561 ELESISTAMITEHWMIPMLHHRQTLYFQGVLKGVSINVWGWPEIHNVWSEE 611
YP_001007308 514 QLREHYNDLMLSGLILPLFNYQYQVNAPPRINGVTLTAYGWFDFSQAWLPA 564
WP_015870478 512 ALRQLYGSLMAQGYMAPLFNYRYQVSVPPRVNGIILTAHGWFDFCQAWVPA 562
WP_013576632 513 ELRDHLFQWMQSAIVTPLFNYQYQVSAPPRISGVQLTAWGWFDFCQAWVPP 563
WP_002444599 513 GLKALYETLMAESVLTPLFNYHYQIHAPPNVQGVHINARGWFDFTRLWLPP 563
WP_025301771 514 RLQAYYQRLMAAAIITPLFHYQYQISAPPRMHGVTLTAHGWFDFCQAWLPP 564
WP_025799975 513 ALRDYYTHLMQQSIIMPLFNYQYQISAPPRVEGVTLTAYGWFDFCRAWVPA 563
WP_029039631 513 ALREVWQTLMHDAVITPLFNYRYQISAPPGVNGIELNALGWFDFSRAWLPP 563
WP_095845595 511 QLHAYFQHLMATATITPLFNYQYQVNAPPHIHGVTLTAYGWFDFSQAWLPP 561
WP_121814213 513 GLQEVFSALMRDAIVSPLFNYRYQISAPPGVNGIELNAWGWFDFTLAWLPP 563
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