Conserved Protein Domain Family
Nu1

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COG4220: Nu1 
Phage DNA packaging protein, Nu1 subunit of terminase [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 443364
Aligned: 30 rows
Threshold Bit Score: 114.767
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_038472676   1 M------------------------------IVNKTQLAGIFEVSARTITTWQAQGCPVENGdgsggRGGdnaYSLKAVI 50 
WP_042462895   1 Mvlqk----------------------qqgkQVNRAGLSEIFGVALPTVDQWARNGCPVVKRg---gRGRewaFDTAVVA 55 
WP_042462895   1 Mvlqk----------------------qqgkQVNRAGLSEIFGVALPTVDQWARNGCPVVKRg---gRGRewaFDTAVVA 55 
WP_014085920   1 Mg----------------------------kIVNKRDLAQIIGVSERTLTEWQREGMPMVLAs---gRGSsnqYDTAAVI 49 
WP_038584467   1 MveknfpdpllkneenadetssapaekllgrNVSQKKLATLLGYDRNTVAKWNERGCPVVQRgd-gsTGTtwiYDLSVVV 79 
WP_058022054   1 Makk------------------------eayWLNKSQVARSLGISTQAFDKW---GVEPVAR-----QGReayFTMRDIL 48 
WP_066134984   1 Msgrk----------------------gagqEVNRTAIAQVFGVALPTIDQWVQVGCPFVCRg---gKGKawiFNTADVA 55 
WP_081562747   1 Magaa-----------------------ggkIVNRQGLAEFFGVSLPTVDAWVRSKVPYLQKg---gKGRewqFDTAAVV 54 
WP_106471693   1 Mgnkv----------------------grgtLLNRTQTAALFGIAATTLDDWVRRGCPVVERg---sRGKrwtFNSADVH 55 
WP_010863318   1 Ma----------------------------vLLNKSDMAESIGISVQAFDKW---GVVPTER-----RGRevlYDVRSVL 44 
WP_038472676  51 DWYCKRETDLEnevlrkelneLQTtvESELVPGTIDYERHRLTRAQADGQELKNAKEAAEVVETAFCMFVLSKIAGEISG 130
WP_042462895  56 RWLRDKAAEEA----------AGE------AVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRA 119
WP_042462895  56 RWLRDKAAEEA----------AGE------AVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRA 119
WP_014085920  50 AWRIAREVNG----------------------AEKESQKDRLDRLRGDQIERQMAVDARELIPSAEIAPALGQFISDAVA 107
WP_038584467  80 KWLQDTAVAKA----------ISKyqSSDGQDTEVFTKR-KRGVAAAEKEQMEAASMARLLVPVEYVLNQLTEDYSGIKT 148
WP_058022054  49 DNRLAHVEARr--------------sSSGADDDDYDAQRTRLTKEQADKLEMENAVTRREQAPVELLEWALAELSQRISA 114
WP_066134984  56 AWREDRIRQEA----------VSS------APADEQELKLRQLLAVTRKAELALLRESGELAPLSQVEKAIATAFAEVRA 119
WP_081562747  55 EWRIRQAEEA-----------SNK------KLASLEAIEKETARVKLEQEKLKLAKAKSLVVPMDQMERRLAIVFAEIRT 117
WP_106471693  56 AWREHDIRSET----------AGV------QLATSDELKRRKLAAETGAAELAYAQAAELVAPVEQIERAMAKAFGEVRA 119
WP_010863318  45 DAWQARQQKKq----------QAEptTDDNAAQKLLLARIALTEEQAKGQQLKNQESEGRVVDTDFCIFALNRIAMELSS 114
WP_038472676 131 ILDGI-PLSMQRRFPALDHRYI--EFLKRDVVKAMNKAAALD-----EKLPGLLSEYLEKTD 184
WP_042462895 120 NLRTI-PGRTVALLLGETDERRykRVLLQEIDQTLENLASLD--------LTQEDTDADEDE 172
WP_042462895 120 NLRTI-PGRTVALLLGETDERRykRVLLQEIDQTLENLASLD--------LTQEDTDADEDE 172
WP_014085920 108 LITGI-PDKYAPIIEAAGSLDAqhAVLEDAVDEIRQLLGSYEfrdrpDNGPATEADASAAQD 168
WP_038584467 149 ALRKI-PDAIAQNVEAAIAAHVr-EIADEIVREAIDKLKIEIsdkpleyer----------- 197
WP_058022054 115 ILGAV-PSKIKKRVPSLTSTEM--TNINREIIKAQNAASKVElp--wDKLPGfd-------- 163
WP_066134984 120 NLRNI-PGRVVARLIGETDAARlkAALLDEIDAALETLASTP-----LISEADLELEEES-- 173
WP_081562747 118 NMRNV-PGRVTSLILGETNERRlvSVLMEEIDRSLAGLSDFD--------TNSLDESVDDRD 170
WP_106471693 120 NLRNVlPSRAARRLIGETSETRlkAVLLEEVDHALEALADTD-----LIAEADLDLSDDEDG 176
WP_010863318 115 ILDSI-PLAVQRQCPDISPHHV--DFLKLQIAKGANCCANAG-----DKLPEWLDEYLSISA 168
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