Conserved Protein Domain Family
M1_APN_like

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cd09603: M1_APN_like 
Peptidase M1 family similar to aminopeptidase N catalytic domain
This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.
Statistics
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PSSM-Id: 341066
Aligned: 490 rows
Threshold Bit Score: 311.056
Created: 15-Sep-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteactive site
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:H H EClick to see conserved feature residue pattern help
Evidence:
  • Comment:the zinc ion is tetrahedrally co-ordinated by three amino acid ligands and a water molecule

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
ELQ78260   36 YDAGSYDVKFDYRpstpkMDATVTMRATArq-dLSRFSLDSagq-eiKSVSVQGaradf------htsnEKLTITpksp- 106  Streptomyces rimo...
KUR69599   48 FDATYYHLTLDVStdpayLTGSTRVVGRArgtpLDVLALDLd-----AAMQVTAvrtpgdaplafthdgDVLRITlpag- 121  Rhodothermaceae b...
CUU34947   53 TDVQHYDLTLEVRpstreLIGSCVMTVKVeqpnLNAFRFRLrdnfliTNLQLDGrpis-------fireSITTVRaqfdr 125  Armatimonadetes b...
AKQ45322   49 YDMHWYKLDLQLErnstdVSGSVTLYASVvatsMTEFAFELhpnftiEQVTLDGtpctvrr--sgseviAVLPVAks--- 123  Rufibacter sp. DG31D
AMS25809   46 YDVTFHHLKLNVErnstiISGSVRTIAKVtasgLDTFGVELh-----RQLIVDSmvl---------gngSKPTVNrdndf 111  Bacteroidetes bac...
AEA45882   52 YDVHYYFLNLNMTnlsttLSGSAEIHAKArv-nLDTALVELynsftiSSIEVDGtpvsyn----rqnsaLKIPINkl--- 123  Fluviicola taffen...
KXK41173   19 YDVHFYYLDIHAErqttiIDGNVTIGATIlt-pTDTFCFELn-----KNLFIDSiwcnnkt--vsfarnEHITYAilds- 89   Bacteroidetes bac...
KOY85580   93 YDVKQYHIDLNIEtnttlVSGNVKFYAQArn-nISTFAFELhpnytvSSVVVKGitynsta-iirnsneARVNLNaai-- 168  bacterium 336/3
AKD03083   54 YNVTFYKLDLHLErnstyISGNVTTNANLqvaqLDTFAFELhpnfqiDSVLVNGrkqas-----isrnaGDVSVKlqtp- 127  Pontibacter korle...
KQC06938   43 FDVLKYDITLDIDdqahyIEGSVTATVLAee-yLTEINYELeel-nvSSVLVNGsaagf------nyedGLITIDlpg-- 112  Candidatus Cloaci...
Feature 1                                                                                     
ELQ78260  107 --------vrkGQTFSVRTDYRADRsknlpnpswpsgvrypmkhwvptedgFALMGQPDRAHLFFPGNDH-PSDKARFTF 177  Streptomyces rimo...
KUR69599  122 --------vppGETVAVDVAYEGVPvqdglgtftf-------dalgrdqpvVWTLSQPYGARAWWPCKDHpSDKADSVRV 186  Rhodothermaceae b...
CUU34947  126 -------pyqqGEVFQLRVDYQGVPvsrgfgsief-------ttrssgaiiVATLSQPYYAYTWWPAKDE-NTDKATLTF 190  Armatimonadetes b...
AKQ45322  124 ----------rQKKVRMQVRYAGRApsgasaaigng----fntgltpygpfSWSLSEPFAASEWFPCKQLlYDKADSVEV 189  Rufibacter sp. DG31D
AMS25809  112 afmilpnslttGQAIDVTIYYHGDAavkasaaigqgf--stgvsgrwgneaTWSLSQPYSAYEWWPCKQSlQDKIDSVFV 189  Bacteroidetes bac...
AEA45882  124 ----------lGQNFVIRVNYSGTPptsatnplggggm-tnasspswgnqvTWSLSEPFSAYEWFPVKQSlKDKADSCSV 192  Fluviicola taffen...
KXK41173   90 -------mystGNQIDIRIFYHGDAhiegdaaigsgf--tvnnsnvwgdtaLYSLSQPNSAYEWFPCKQFlEDKADSAWV 160  Bacteroidetes bac...
KOY85580  169 ---------nqNELFEATIYYSGNGpvdnsnidagf----cqrtnssnkkyTYTMSQPYGTADWMPVKQIlSDKADSVKV 235  bacterium 336/3
AKD03083  128 --------vtaPAKVTAQIFYKGTApsgasaaigngfs-tarevnwgganvTWSLSQPYAGYEWWPTKQIlTDKADSVHV 198  Pontibacter korle...
KQC06938  113 --------iasGEEFTTTVEYYGYPqlsddiysi---------gmifninyVFTLSDPSGCRWWFPAYDH-PWDKAEIDF 174  Candidatus Cloaci...
Feature 1                                                                                     
ELQ78260  178 RISTPknLQAAANGs---LISRRta--gdRTTYTFRTRhPIPTHVVQVAVGKYRevkq-----------rgpHGLSIHSY 241  Streptomyces rimo...
KUR69599  187 TVTVPagLRVGSNGl---LIGEHtdr-dgRTTYDWRSRyPIATYLVFFAAGPYEvleqtytrpdslaarygpLALPILHY 262  Rhodothermaceae b...
CUU34947  191 SLIVPdtMIAVANGm---LQGVDtls-gnRLRYRYQHNyPIAPYLVAFAATNYNhwsqt--------ftygeHTMPVDFY 258  Armatimonadetes b...
AKQ45322  190 WVTTDvlNKVGSNG----LLQRVtpmpnqKHRYEWKSNyPIAYYLISVALGQYEeysfpv------tlpgapQPMLVQNY 259  Rufibacter sp. DG31D
AMS25809  190 DVTTSneNKVGSQG----LLKAVvslpnnKVRYEWKSFyPIDYYLISVAVAKYVeykty--------ariggDSIFIQDY 257  Bacteroidetes bac...
AEA45882  193 WVTVPsnCKAGSNG----LLQQVvdlgngTHRFEWKHKhPIDYYLISVAVAKYVeynvta-------npagsGPVLIQNF 261  Fluviicola taffen...
KXK41173  161 FVTTNqeNKVGSNGl---LVGVDtiegtnLVKYKWKTYySICYYLISIAVGQYLdytfyah-----ppsypsDSIKVVNY 232  Bacteroidetes bac...
KOY85580  236 YITTSntNKVGSQGv---LKNVVsvg-ggKSRHEWESKyPIAYYLISFAVGEYVdytin--------anlggTNIPIVNY 303  bacterium 336/3
AKD03083  199 FVTTSaeNKVGSNGl---LTNTVqlp-nnKVRYEWKSRyPIAYYLISVAVSDYLeynlla------nptgapTPIPIINY 268  Pontibacter korle...
KQC06938  175 HVTMRddWLVACNGirtgIEDNEd----gTKTHHWLGSnPMATHLPCISAANFIein------------qdyDGMQIQNF 238  Candidatus Cloaci...
Feature 1                                                                                     
ELQ78260  242 VPAdq---yAQLKPVVGKTPAQVAWLEkeiGRPFP--FEAYGMLAVkspynGVALETA--TLSTFSSlglnrpagqVEPV 314  Streptomyces rimo...
KUR69599  263 AYPg-----SGVLPGWQRVTDVLPVLEd-wFGPYPfpDEKYGHAHFt---ySGGMEHQ--TMSSMGSs--------WIGL 323  Rhodothermaceae b...
CUU34947  259 IYPes--dtTANRQAWERCLPMLRVFSd-iFGLYPfiNERYGIYQFq---fSGGMEHQ--TMTGQGGf--------WESV 322  Armatimonadetes b...
AKQ45322  260 IYPqt---lPSVKADIDITASFLQIFSe-hFGLYPfyKEKYGHSMAp---iGGGMEHQ--TMTTQSSf--------GFTL 322  Rufibacter sp. DG31D
AMS25809  258 IYDnpq-tlITFKPVLDQTAKMLEAFSe-hFGMYPfaTEKYGHAMAp---fSGGMEHQ--TMTSIGVi--------DFGI 322  Bacteroidetes bac...
AEA45882  262 IYDnpg-tlPNFQNDIDETVDFIELYAd-lYGPYPfaDEKYGHCMAp---iSGGMEHQ--TMTTQGFf--------NPTL 326  Fluviicola taffen...
KXK41173  233 IYStnpntyTTIKPHLDSVANMLEYFSe-kIGLYPfyKEKYGHSMTp---fGGGMEHQtmTSTEYTA---------HFTL 299  Bacteroidetes bac...
KOY85580  304 VYDna--tvTANQASLDQTKLTLEKFSq-sFGDYPfkLEKYGHCQVp---hNFYLENQ--TMSTMINf--------PNTI 367  bacterium 336/3
AKD03083  269 VYNtt--tlNQFKSQIDLTVPLLETFSd-lFTLYPfaKEKYGHSMAp---mGGGMEHQ--TITTQSTf--------NFTL 332  Pontibacter korle...
KQC06938  239 VTPnq---eGDAIIDFQNLPATIDLYSd-kFGEYP--FEKYGNAVVpm-vtFGAMEHQ--TMTTLAMymit-gdmsYEVT 308  Candidatus Cloaci...
Feature 1       #   #                  #                                                      
ELQ78260  315 MAHELVHQYFGDaVSVRSWdDMWISEGHAHYYQKRYEa----ARGFSk------iEEDMRTLYEHDAKERqesgpagkl- 383  Streptomyces rimo...
KUR69599  324 VVHELAHQWFGDlITPASWpHLWLNEGFATYAELLYYearpeAYDYEp------iFDIYWNRARRAPGTLlvtdtldv-- 395  Rhodothermaceae b...
CUU34947  323 TAHELGHQWWGDmVTCATWnDIWLNEGFATYSEALWE-----ERKPGss-----gFPALRTAMLNRRPSSldgsvyrydt 392  Armatimonadetes b...
AKQ45322  323 TAHELAHQWWGGeVTCADWsHIWLNEGFASYSEYLAL-----EKLRPl------dKRGWLTTARSSAASQetgmvfvkds 391  Rufibacter sp. DG31D
AMS25809  323 VAHELGHQWFGDhVTCKTWkDIWLNEGFATYTEYLAAe----WLKLGtqa--qemTDNHSRIMQAPGGSVwvadttsv-- 394  Bacteroidetes bac...
AEA45882  327 TAHELAHQWFGDhVTCSSWaDIWVNEGFASYSEYIML-----ENLYPgdel-qdmLDKHSNIMSQTGGSVwvqdslnd-- 398  Fluviicola taffen...
KXK41173  300 LAHELFHQWFGDfVTCKSWkDIYINEGLASYGEYIAL-----EGLKGydaaqarmIEAHNVALQAIKGSIyvpdtidv-- 372  Bacteroidetes bac...
KOY85580  368 VAHELAHQWHGDaMSLKSFsEIGLSEGFANYSEFLYR-----EYFINla----saQTTYRGWVNSITSQPggsvylvdsl 438  bacterium 336/3
AKD03083  333 TAHELAHQWFGDnVTCATWqDIWLNEGFASYAEYLAL-----EQLQPfya--pewMSTAQGRVLAVPTGSvfvedttnv- 404  Pontibacter korle...
KQC06938  309 IAHELAHQWFGNcLTPLTWaDVWLSEGFATYSEAIYM-----EEFYG--------RAAMLDYVFQNIQQYylgwasggsy 375  Candidatus Cloaci...
Feature 1                                                                                     
ELQ78260  384 -----tspsavmfnTNAPGALMLHGLRNq-VGDWTFRRIEQSFFDRyrnk--aasTQDYIDVANKv-SGRDLAPYIKSWL 454  Streptomyces rimo...
KUR69599  396 ------ytlfdnrrVYARGGMVLHMLRHv-IGEDAFRRTLQTYAADpdlrfgtaaTADFQRIAEAv-SGQDLSAFFRQWV 467  Rhodothermaceae b...
CUU34947  393 s---sinaifssnfAYRKGAWVLHQLRWv-LGDARFFDLLARYRQRfays--hatTEDFVAVAEEv-WGGSMRWFFDPWV 465  Armatimonadetes b...
AKQ45322  392 t---svprifnsalTYRKGAMVLHMLRHavGSDALFFKILQAYRKEyqhk--vatTRDFQKVVERe-TGKPYKYFFDQWV 465  Rufibacter sp. DG31D
AMS25809  395 ------srifdsrlSYAKGGAFVHILRFevNNDSLFFAFLRQYQQQfaya--tanTVEFKTLLEQm-TGKDFTQVFNQWF 465  Bacteroidetes bac...
AEA45882  399 ------gsifserlVYNKGAAIVHTLRFlvGNDQVFFDALKNFQVIyads--vasAIQLIDVVENe-SGLDFTNYTEEWY 469  Fluviicola taffen...
KXK41173  373 ------grifngqlTYNKGSAVTHTLRYl-LGDSLFFSSLQNFLNEysfs--tagIKEFKESIEQs-SGKDLNDFFNQWY 442  Bacteroidetes bac...
KOY85580  439 ----dtdamfnsrlIYQKGASLIHMIRYliNDDDKFYQALRAYTAQyqhk--tvtYNDFAGVINTvtGVNLTQDFLPQWY 512  bacterium 336/3
AKD03083  405 ------srifnyrlSYAKGATVLHMLRFtiDNDELFFEALRSYQQQlggs--tatTADLQRVFEEt-TNLNLDYFFEQWY 475  Pontibacter korle...
KQC06938  376 tvydpvynsyfnpvQYEKAASILHMLRKt-VGDEDFYSILQNYFQEyhnq--cviTSDFQGIIEDy-TGDDFSQFFQQWI 451  Candidatus Cloaci...
Feature 1      
ELQ78260  455 Y 455  Streptomyces rimosus subsp. rimosus ATCC 10970
KUR69599  468 T 468  Rhodothermaceae bacterium RA
CUU34947  466 Y 466  Armatimonadetes bacterium GXS
AKQ45322  466 Y 466  Rufibacter sp. DG31D
AMS25809  466 Y 466  Bacteroidetes bacterium UKL13-3
AEA45882  470 F 470  Fluviicola taffensis DSM 16823
KXK41173  443 Y 443  Bacteroidetes bacterium OLB11
KOY85580  513 K 513  bacterium 336/3
AKD03083  476 K 476  Pontibacter korlensis
KQC06938  452 F 452  Candidatus Cloacimonas sp. SDB

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