Conserved Protein Domain Family
akirin

?
cd22240: akirin 
akirin
Akirins are small, highly conserved eumetazoan nuclear proteins that play a role in immune response and tumorigenesis. It is believed that they act as a connector between a variety of transcription factors and major chromatin remodeling complexes. In vertebrates, there are two orthologs, Akirin1 and Akirin2.
Statistics
?
PSSM-Id: 412034
Aligned: 24 rows
Threshold Bit Score: 153.231
Created: 6-Mar-2020
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
 
nuclear
Feature 1:nuclear localization signal
Evidence:
  • Comment:akirins show a clear nuclear localization signal (NLS) located at the N-terminus

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                 ######                                                 
XP_002736520   2 ACGATLKRtldfd----plhspSPSPKRRRCVPIippttpqtkahkl---------------epspfgqvspklTPEQLS 62  Saccoglossus ko...
NP_001180524   2 ACGATLKRtldfd-----pllsPASPKRRRCAPLsapasaaassssfaspq------kylrmepspfgevssrlTTEQIL 70  Gallus gallus
Q9H9L7         2 ACGATLKRpmefe----aallsPGSPKRRRCAPLpgptpglrppdaeppppfqtqtppqslqqpappgserrlpTPEQIF 77  Homo sapiens
XP_796196      2 ACATLKRTldfdp-----lhspGTSPKRRRCSPIitpstptskssl----------------qqspfspvtpriSPGQLV 60  Strongylocentro...
AHM27301       2 ACGATLKRshdfdp---lhspgQGTPKRRRCMPMtlspstpptkahq--------------lnpspfadvtpkyTSEQIA 64  Haliotis divers...
ELU00237       2 ACGATLSLkrslefd-plyspsHKSPKRRRCMPMtlspstpptkqa----------------npspfaevtpklTSEQIA 64  Capitella teleta
XP_002166734   2 ACAALKRPynfdilsqstpqlnSSSPKRQRCGTVavastssnvs---------------------pflsatpklSREDLA 60  Hydra vulgaris
KXJ17033       2 ACATLKRSyefdp-----llspQPSSKRRRCIPMstpssspsasptt---------------kdsafadvtpriSQEQLA 61  
XP_019851260   2 ACVTLKRPlevmg-----sphmETSPKRRCGIPLi---------------------------------------SSTPPS 37  Amphimedon quee...
XP_005109687   2 ACGATLKRtlefdp--lhspsqPGPIKRRRCMPLtmaqttpptklhq--------------ltpspfsevtpklTKEEIA 65  California sea ...
Feature 1                                                                                        
XP_002736520  63 NSVLLEYKRMq-RRKKLATAftsgggsscststypapgpshqqqqsaaataatqmshpsylsqhvqllamspvaststsp 141 Saccoglossus ko...
NP_001180524  71 YNIKQEYKRMq-KRRHLENSfqqtdpccstdaqphafll------------------------------tgpalpgtssa 119 Gallus gallus
Q9H9L7        78 QNIKQEYSRYq-RWRHLEVVlnqseacasesqphss------------------------------------altapssp 120 Homo sapiens
XP_796196     61 AHISHEWRRIr-RRKRLEESysseapsssemvehssrfgltssamveqasrfgltsgcfspppststnpmpqptmpsgss 139 Strongylocentro...
AHM27301      65 ASISLEIKKMq-RRRQLQYPgstspphpsmdmpstsgmes----------------------------ptsansqsslyn 115 Haliotis divers...
ELU00237      65 QHLSCELRRMh-RRRQLHLSgsaspphpgsvspshpsats---------------------------ssmggecstssgt 116 Capitella teleta
XP_002166734  61 KNVQEEWCRY--RCRKKCISpssspnsmqfqqctslywng----------------------------sssntssismsp 110 Hydra vulgaris
KXJ17033      62 TNIHLEWKRLq-RRKHLKAPssnsveamstv---------------------------------------------issp 95  
XP_019851260  38 RTSFKKRKRMleTENKPAPVstpsspfiastpsva--------------------------------------nieseir 79  Amphimedon quee...
XP_005109687  66 ARIGSELKRMq-RRRQLFYPtssspppsvnaisidrqspppsqdila--------------hnaisvdsfpsssphsstg 130 California sea ...
Feature 1                                                                                
XP_002736520 142 ssspsrrEQPIFTLRQVIMLCERLLKEREEQIKAEYDKTLTCKLAEQYEAFLKFNHDQLHRRFgetaASYVS 213 Saccoglossus kowalevskii
NP_001180524 120 assplkkEQPLFTLRQVGMICERLLKEREEKIREEYEEILTTKLAEQYDAFVKFTHDQIMRRYgeqpASYVS 191 Gallus gallus
Q9H9L7       121 gsswmkkDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIMRRYgtrpTSYVS 192 Homo sapiens
XP_796196    140 lqqtqtkDQPMFTLKQVILICEQMLKEQESRIREEYDKALSCKLAEQYDAFVKFNQDQIQRRFtstsMSYVS 211 Strongylocentrotus purp...
AHM27301     116 alspskkDVPLFTFRQVSMICERMVKDREDQIREEYNSVLTNKVAEQYEAFLKFNHDQLRRRFgdapMSYVS 187 Haliotis diversicolor
ELU00237     117 mspsgkkDVPLLSLRQVGMVCERLLKEQEEHIREEYDKVLTNKLAEQYEAFLKFNHDQLHRRFqesaASYVS 188 Capitella teleta
XP_002166734 111 prspngsDSPSLKIKQVVLLCERLWKEREEKLREEYDQVLNEKLAEQYESFLKFTQDQIMRKYqhssYSYVS 182 Hydra vulgaris
KXJ17033      96 sssptrkDQPLFTLKQVSLICERLLKERDTQLREQYDKVLNNKLSEQYDAFVKFNYDQVQRRFersaPTWAV 167 
XP_019851260  80 rlhgpskDQPLFTMKQVTMICQRMLKEREETLKAEYDKILSAKLLEQYDAFVKFSHDQVERRFaesaFSYVS 151 Amphimedon queenslandica
XP_005109687 131 tcspkqrDVPLFTFKQVTMICERMCQEQEEKIRENYDKVLNNKLSEQYEAFLKFNHDQLQKRFgnapMSYVS 202 California sea hare

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap