Conserved Protein Domain Family
RAM

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pfam15320: RAM 
mRNA cap methylation, RNMT-activating mini protein
This family of proteins is found in eukaryotes. Proteins in this family are typically between 102 and 154 amino acids in length. There is a single completely conserved residue D that may be functionally important. RAM is a family of eukaryotic proteins that are an obligate component of the mammalian cap methyltransferase, RNMT (RNA guanine-7 methyltransferase). RAM consists of an N-terminal RNMT-activating domain and a C-terminal RNA-binding domain. Either RAM or RNMT independently have rather weak binding affinity for RNA, but together their RNA affinity is significantly increased. RAM is necessary for efficient cap methylation, maintaining mRNA expression levels, for mRNA translation and for cell viability.
Statistics
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PSSM-Id: 464643
Aligned: 26 rows
Threshold Bit Score: 45.0486
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDV96820      21 ECEAEFALRYTTDDVEFMAHCAKADPEPPLVENWMggr-----ggGGGGGGGGggggdragagfsgQYNN--RYNggQRR 93 
Q9W033        21 SCELEFADRFTDDDPEFMAHCSKPVPEPPIVENWMg--------gGGGGGGFQgggg------gghPYHN--RYNg-HRR 83  fruit fly
XP_001955875  21 ECELEFTGRFTDDDPEFMAHCSKPFPDPPIVENWTg--------gGGGGGGGGssgrd---agypyKNHN--RFNg-HHQ 86 
EFA03032      15 ECALEFSDRFTDADFEYKKIFDLGIPKPPIMSPWYsk----------------------------------aRFN--RDR 58 
XP_012054439  16 ECEEEFKDRYTEKDDDFMKIKTQEPKKPPIVDPWYnkp----------------------------rrHDwsRQN--QNQ 65 
XP_008213785  14 ECEKEFKDRFTEKDEDFMKVKLGESLKPPIVDPWNear-----qrNRTGQRNIq-----------sPRITssRQN--RKR 75 
2_pfamImport   1 KLDEMFKDRYTGNDERYKKMAEEGFEKVVVIHPWNssrdnynrdnHRGG-----------------------FGGgcGRG 57 
O61743         6 SLDELFKDRYSQNDERYKKMSETGFEPVIVVHPWEprrnnnyrnrGNFGGG---------------------RGGgyQHR 64  Caenorhabditis ...
XP_002640290   6 SLDELFKDRYTEKDERYKKMAETGFEKVIVVHPWDprr-------------------------------nnfRGRggSGY 54 
XP_002407737  26 RLEEKFKYRYTDQDPSYMKVVNKPPVPPPCVYPWFvqnr---rpfGRRGGHQGgyd--------rgRDRSdyRQDswSRA 94 
EDV96820      94 GGgdRGWQRR----GG-----YNHY---KDRGF 114
Q9W033        84 GGgdRGWQRR----GG-----AGYHn-nQDRGF 106 fruit fly
XP_001955875  87 RGgdRGWHRR----GG-----GGNYn-hHDRGF 109
EFA03032      59 GEnrYNERRDyrsdNH-----RDRSsyyKDRRY 86 
XP_012054439  66 NHdrRNHHWDrrnnER-----NEKLerhGGRHF 93 
XP_008213785  76 TKrkRDRTSDrgrgDR-----ERDRsrsRRDGR 103
2_pfamImport  58 NGnyRGNWNPrgrgGYy-----------GDRRD 79 
O61743        65 DNsnRGGWVPrgggQR-----GGYRggwQDRGG 92  Caenorhabditis elegans
XP_002640290  55 NNqnRGGWVPrgegGGgrgqyGGYRggwQDRGG 87 
XP_002407737  95 GGssRNW-------ED-----RDRSrdyQDRGR 115
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