Conserved Protein Domain Family
vWA_copine_like

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cd01459: vWA_copine_like 
VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. Phylogenetic distribution suggests that copines have been lost in some eukaryotes. No functional properties have been assigned to the VWA domains present in copines. The members of this subgroup contain a functional MIDAS motif based on their preferential binding to magnesium and manganese. However, the MIDAS motif is not totally conserved, in most cases the MIDAS consists of the sequence DxTxS instead of the motif DxSxS that is found in most cases. The C2 domains present in copines mediate phospholipid binding.
Statistics
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PSSM-Id: 238736
Aligned: 12 rows
Threshold Bit Score: 324.325
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                               # # #                                  
EAA40946    14 IKNYYKTYEELea------------gLRKAGVESmQMVVGIDFSKSNEWTGEKsy-rRALHDa--RGGETPYSKAMRIMS 78   Giardia lamblia ...
EAA40884    15 IKEVYRSFPELtl------------aLREASMESsQIILAFDFSKSNEWSGEKty-rRSLHD---ITQETPYEKVCRLLI 78   Giardia lamblia ...
Q09221    1380 NIPHFKTLDDIvk------------aIKHAGLEYsNLIFGIDYTKSNFYQGERtfdkRPLHTi-dPAEMNPYQQVIQIVG 1446 Caenorhabditis e...
BAA96900    14 IADHFSSLDQVit------------sLREAGLESsNLILGIDFTKSNEWTGRYsfnrKSLHAi--GKRQNPYEKAISIIG 79   thale cress
BAB63607    34 IPDNYSSVDEVta------------aLRDAGLESsNLILGIDFTKSNEWSGRYsfgrKSLHAi--SATPNPYEQAISIIG 99   Japanese rice
AAO52028    41 IKDKFQSLQEVqd------------aLRTAGLESsNLIIGIDYTKSNTWNGKKtfggKCLHDi-qPGMLNPYQEAIEIIG 107  Dictyostelium di...
AAB70417   372 RNKVLKGQLIVdryvekv--qysfldYISSGFEL-NFMVAVDFTASNGDPRTP----SSLHYidpSGRLNSYQQAIMEVG 444  thale cress
Q9XUB9     304 KGDKYKCSGTLkiwnsrivieptfldFISGGTQL-DFAVAVDFTASNGPPKSS----SSLHFm-sADRPNQYELALRSVL 377  Caenorhabditis e...
Q9HCH3     294 KKKKYVNSGTVtllsfavesectfldYIKGGTQI-NFTVAIDFTASNGNPSQS----TSLHYm-sPYQLNAYALALTAVG 367  human
AAH50240   256 KKKSYKNSGVIkikdckletqysfldYVMGGCQI-NFTVGIDFTGSNGGPRSP----DSLHYl-nPNGVNQYLSAIWSVG 329  zebrafish
AAK98797   309 QNKVLKSQLFVdkftetv--hhtfleYLASGFEL-NFMVAIDFTASNGNPRLP----DSLHYidpSGRLNAYQRAIMDVG 381  thale cress
AAO51303   260 KSGSYKNSGVItftdcrlvgqptfidYLSGGCEI-NLMVAIDCTASNGSPSTS----TSLHYh-tPSHPSQYAKSIFSVG 333  Dictyostelium di...
Feature 1                                                                      #               
EAA40946    79 RVISRFDDDDIYPVYRFGCINTKDKSVLPLly--pdQEDPHFEGFDAVKRAYEHIAPQIEMSGPTTFAPMIRQAIEISKE 156  Giardia lamblia ...
EAA40884    79 PVITSFDSDSIIPAIRFGCSVSKDQIVCPLnp---ySKSPECQGFAEVLHNYREAVRMVKLSGPTSLSPVVRYAINIVKK 155  Giardia lamblia ...
Q09221    1447 KTLSSFDADGQIPAYGFGDEEFTDHGIFNIae--ryDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLIDRAIEICKE 1524 Caenorhabditis e...
BAA96900    80 RTLSPFDEDDLIPCFGFGDVTTRDQYVFSFy-----PENKSCDGLENAVKRYREIVPHLKLSGPTSFAPVIDAAINIVEQ 154  thale cress
BAB63607   100 RTLSPFDDDNLIPCFGFGDASTHDQSVFSFy-----QDSRSCCGFEEVLERYRQIVPHLNLSGPTSFAPLIYAAISVVEN 174  Japanese rice
AAO52028   108 KTLSVFDDDNLLPTYGFGDSRTTDKSVFSF------TTERPCFGFNEVLQKYNEITPLVSLSGPTSFAPIIRETINITAA 181  Dictyostelium di...
AAB70417   445 EVIQFYDSDKRFPAWGFGGRTSDGSVSHAFnln-gaSYGDEVVGVEGIMVAYASALRNVSLAGPTLFSNVVDKAAHTASQ 523  thale cress
Q9XUB9     378 SICQHYNSSKTFEAFGFGAKLPNQSSVSAIfpldlqRGTSEVVGITGVMTAYRHALSNVQLYGPTNFAPIIENVARKAQN 457  Caenorhabditis e...
Q9HCH3     368 EIIQHYDSDKMFPALGFGAKLPPDGRVSHEfplngnQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAA 447  human
AAH50240   330 QVVQDYDSDKLFPAFGFGAQVPPNFQVSHEfplnfnPNSPYCQGVEGIVNAYRSVLPQLRLYGPTNFSPIINHVARIASG 409  zebrafish
AAK98797   382 EVLQFYDSDKRFPAWGFGARPIDAPVSHCFnln-gsSSYSQVDGIQGIMTSYTSALFNVSLAGPTLFGPVINAAAMIASA 460  thale cress
AAO51303   334 SVLAPYDSDGNIEVLGFGGIHRGSTSHCFQf-----GSKKEVRGVEGVLLTYGEVIPSMSLSYPTNFKDIISYAAKKSLD 408  Dictyostelium di...
Feature 1                       #                                                              
EAA40946   157 SNGq-----YMILVLLTDGDVSDMVED------------MKALQEASNYPLSIVAVGLGDGPFDKMHIFDd--------- 210  Giardia lamblia ...
EAA40884   156 TRE------YHILIILTDGDPVSSVAD------------ADAIAEASNYPLSIVAVGLGDGPFKILQSFDt--------- 208  Giardia lamblia ...
Q09221    1525 KHS------YHILVIVADGQVTNEKIN------------QKAIAAASHYPLSIIMVGVGDGPWNMMGRFDd--------- 1577 Caenorhabditis e...
BAA96900   155 NNMq-----YHVLVIIADGQVTRNPDVplgrlspqeeatMNSIMAASHYPLSIVLVGVGDGPWDTMKQFDd--------- 220  thale cress
BAB63607   175 SNLq-----YHVLVIIADGQVTTSNTKdgklsp-qeqatIQAIVDASYYPLSIVMVGVGDGPWDAMQHFDd--------- 239  Japanese rice
AAO52028   182 AKA------YHILVIIADGEVSVVNET------------IKAIEEASKYPISIICIGVGDGPWDTMEKFDd--------- 234  Dictyostelium di...
AAB70417   524 SLSqns-pkYFVLLIITDGVLTDMAGT------------VDALVRASDLPLSVLIVGVGNTDFKQMEMLDadngrrless 590  thale cress
Q9XUB9     458 MIHds--arYQILLIITDGIISDMHAT------------IRSIISASGLPLSIIIIGVGNEDFEKMHELDsdda--llqq 521  Caenorhabditis e...
Q9HCH3     448 VQDgs---qYSVLLIITDGVISDMAQT------------KEAIVNAAKLPMSIIIVGVGQAEFDAMVELDgddv--riss 510  human
AAH50240   410 AAQqpnaaqYFVLLIITDGEITDLDQT------------RQSIVNSSKLPMSIIIVGVGEADFKAMEFLDgdngv-lksi 476  zebrafish
AAK98797   461 SLAqgs-rkYYVLLIITDGVITDLQET------------KDALVSASDLPLSILIVGVGGADFKEMEILDadkgerless 527  thale cress
AAO51303   409 GVTsks-qkYTILLILTDGEISDMNETv-----------HEIVKASKQSPLSIVIIGIGEATFDNMNRLDgddgnsltds 476  Dictyostelium di...
Feature 1                                                      
EAA40946   211 DVRGRKFDNFQFVNFTEVemkagkc----enpelvLATAMMQEIPSQF 254  Giardia lamblia ATCC 50803
EAA40884   209 QYYNRRFDNFHFVNFTELetkfins----nrpdllLATELFVEIPKQY 252  Giardia lamblia ATCC 50803
Q09221    1578 NIPKRLFDNFHFVDFHKVmfnap-------nadasFALNALMEIPDQY 1618 Caenorhabditis elegans
BAA96900   221 NIPHREFDNFQFVNFTKImsehkda----akkeaaFALAALMEIPFQY 264  thale cress
BAB63607   240 CIPDRAFDNFQFVNFTEImstskdm----pkkeaaFALAALMEIPSQY 283  Japanese rice
AAO52028   235 DLPERQFDNFQFVPFHTTmakae-------nrevdFAVAALQEIPEQF 275  Dictyostelium discoideum
AAB70417   591 TGRIATRDIVQFVPMKDIhsg-----------lvsVVQALLEELPGQF 627  thale cress
Q9XUB9     522 DSRIAQRDIVQFVTMREFlnngqglyldpdviqenLAREVLYEVPAQL 569  Caenorhabditis elegans
Q9HCH3     511 RGKLAERDIVQFVPFRDYvdrtgnh----vlsmarLARDVLAEIPDQL 554  human
AAH50240   477 TGESAVRDIVQFVPFKQFanap----------keaLAQSVLAEVPSQL 514  zebrafish
AAK98797   528 SGRLASRDIVQFVALRDVqyg-----------eisVVQALLAELPSQF 564  thale cress
AAO51303   477 SGQTATRDIVQFVPFNNFsan-----------peaLATETLREIPQQL 513  Dictyostelium discoideum

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