Conserved Protein Domain Family
Lipocalin_2

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pfam08212: Lipocalin_2 
Lipocalin-like domain
Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The structure is an eight-stranded beta barrel.
Statistics
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PSSM-Id: 400495
Aligned: 17 rows
Threshold Bit Score: 162.117
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8S9H0        16 LD-VARYMGRWYEIASFPNFFQpRDGRDTRATYELMEDGaTVHVLNETW---SKG---KRDFIEGTAYKADPASeEAKLK 88  bread wheat
Q8P441        29 LD-LSRYLGTWYEIARLPIRFEdADCTDVSAHYSLDADG-GIRVQNRCFt--AKG---ELEEAVGQARAIDET--GARLE 99  Xanthomonas cam...
Q8P819        30 LD-ISRYAGQWHEIAHLPVSFQkKCRSDITASYTLRDDG-LIGVRNGCRv--ADG---SLTQADGVARPVAGH--PGQLQ 100 Xanthomonas cam...
Q8FRW3        61 VD-LERYQGKWYQVAAIPQPYTlQCSNDTTAEYEKIDEN-TISVANSCGt--PFG----PSVIQGKATVRS----DASLK 128 Corynebacterium...
Q8NSP0        61 ID-LERYKGKWYQVAAIPQPFSlQCSHDVTADYGVIDSD-TISVTNKCGt--FFG----PSVIEGSAKVVS----NASLK 128 Corynebacterium...
Q9A4B9        24 IDpARHYSGVWMEVGRTPMRIT-KGCVAATTVYNRVDER-RIAVEDDCRqggVEG---KRRAIKGDGVIEDPGV-NRRLK 97  Caulobacter vib...
1_pfamImport   1 VD-AGHYRGTWLEIGRMPMLLT-DGCVAGYSTYRQGKSAdEVLVEDGCRegtPQG---KLKTINGVGKIEDFAStKAKMR 75 
Q9A2S8        38 VE-LDRYLGKWYEVARYDMRFQ-KGCEGVTAEYSRRPDG-LIRVFNTCRqdaVDG---PVRTAEGKAKVVDTAT-NAKLK 110 Caulobacter vib...
Q8P3E8        38 VD-VPRFMGDWYVIAHIPTRPE-RKAFDAVERYALRPDG-RIQTTFTFRkgsFQA---PLKSMHPVGQVAKEGN-GALWS 110 Xanthomonas cam...
Q89Z84       293 LD-LKRYMGLWYEIARYDHRFE-RGLMEVTATYTLRPDG-TIRVENRGYk--RNSpydICRTATGHAKIPDPAQ-PGKLK 366 Bacteroides the...
Q8S9H0        89 VKFYVPPFlpiiPVVGDYWVLYVDDD-YQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQ 164 bread wheat
Q8P441       100 VTFLPEGLrwipFTKGDYWVMRIDSD-YTAALVGSPDRKYLWLLARLPQLDENIAQTYLAHAREQGFDLAPLIHTPH 175 Xanthomonas campes...
Q8P819       101 VRFAPEWLswipLVWADYWVIALDPD-YQWAVVGEPDRKYLWILSRSPEMPRAQFEQLKATATQMGYDLSPLIVAAP 176 Xanthomonas campes...
Q8FRW3       129 VTFGGVPFqt-eEGEPNYRVTYLEDD-YSLAIVGSPNRLSGFVLSRTPDLSPEDWTKVRNITEDRGWWSCAFVTVPA 203 Corynebacterium ef...
Q8NSP0       129 VSFPGIPFqs-eDNQANYRVTYIEDD-YSLAIVGSPSRSSGFILSRTPQLSSDQWSHVRNITEDSGWWPCAFITVPA 203 Corynebacterium gl...
Q9A4B9        98 VSYLP-------FVTWRYEVLDQDPA-GAWFISASPDRRKVFLYTRAPA-SPELLKTMTERARALGY-AGEIEYPAP 164 Caulobacter vibrio...
1_pfamImport  76 VRYPL-------LITFNYWVLYKSPD-KSWFISANPSTEDVWVYARSVP-SKAKLNRMMMKVRELGYDVKKLEFPAQ 143
Q9A2S8       111 VSFFGPFF-------GDYWVMDHADD-YSWAIVGEGSGRYLWLLSRQPP-SDADRVALTARAKALGYDVGLLRPTKQ 178 Caulobacter vibrio...
Q8P3E8       111 MQFLW-------PFKAEYVIAWRDAN-YTQTIVARSKRDYVWYMARTPQVSDADYQQAVGRIAAMGYDVTQLRRVPQ 179 Xanthomonas campes...
Q89Z84       367 VSFFL-------NFYSDYYVMELDQEnYNYALIGSSTDKYLWILSRTPQLPEDIKKKLVTAAERRGYDTNRLQWIEQ 436 Bacteroides thetai...
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