3B0B,4E44,4DRA,3VH5,4DRB,4NDY,4NDY,4NE3,3V9R


Conserved Protein Domain Family
HFD_CENP-X

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cd22921: HFD_CENP-X 
histone-fold domain found in centromere protein X (CENP-X) and similar proteins
CENP-X, also called MHF2, FANCM-associated histone fold protein 2, FANCM-interacting histone fold protein 2, Fanconi anemia-associated polypeptide of 10 kDa, retinoic acid-inducible gene D9 protein homolog, or stimulated by retinoic acid gene 13 protein homolog, is a DNA-binding component of the Fanconi anemia (FA) core complex. It is required for the normal activation of the FA pathway, leading to monoubiquitination of the FANCI-FANCD2 complex in response to DNA damage, cellular resistance to DNA cross-linking drugs, and prevention of chromosomal breakage. CENP-X, together with CENP-S, forms the MHF heterodimer, which can further assemble to form tetrameric structures. CENP-X acts as a crucial cofactor for FANCM in both binding and ATP-dependent remodeling of DNA. It can stabilize FANCM. CENP-X also forms a discrete complex with FANCM and CENP-S, called FANCM-MHF. This interaction leads to synergistic activation of double-stranded DNA binding and strongly stimulates FANCM-mediated DNA remodeling. In complex with CENP-T, CENP-W and CENP-S (CENP-T-W-S-X heterotetramer), CENP-X is involved in the formation of a functional kinetochore outer plate, which is essential for kinetochore-microtubule attachment and faithful mitotic progression. As a component of the MHF and CENP-T-W-S-X complexes, CENP-X binds DNA and bends it to form a nucleosome-like structure. Its DNA-binding function is fulfilled in the presence of CENP-S. It does not bind DNA on its own.
Statistics
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PSSM-Id: 467046
Aligned: 77 rows
Threshold Bit Score: 52.1872
Created: 5-Mar-2021
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
heterodimertetramer
Conserved site includes 45 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:3VH6: Gallus gallus Cenp-S forms a heterodimer with Cenp-X; contacts at 4A
  • Structure:3V9R: Saccharomyces cerevisiae MHF1 forms a heterodimer with MHF2; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ### ##  ### ####   ##### ## ### ######## ###   #  #                             
3B0B_C         8 GFRKETVERLLRLHFRd-gRTRVNGDALLLXAELLKVFVREAAARAARQAQAed-------------------------- 60  chicken
3VH5_D         8 GFRKETVERLLRLHFRd-gRTRVNGDALLLMAELLKVFVREAAARAARQAQAed-------------------------- 60  chicken
KAA8898437     6 TFSEDAVHKIFNDASFtrkDTRISGDALKCCAEYLRVFTREAIWRSDQERQErqagmrd--------------------- 64  Trichomonascus ...
XP_018226297  11 TYPPQTIAKIFSLAFTd-pTTKISASALTLCSEYIRIFCKEAIWRAAASKREqenkd----------------------- 66  Pneumocystis ca...
VVT57757      99 CYPPQLIIRILSSMAFrnsDTRISAEALDAVAEYLRIFTREAIWRSENERRLeitnaegprl------------------ 160 Saprochaete ingens
QBM90485       1 MVPPSTVARVFSEVSFardSTRITSSAVALSAEYIRLFVLEAILRANAQRLSeekpteidgidntenidtrdalethdqf 80  Metschnikowia a...
KAA8906025     2 SVDPQTLERVFKDRAFvesSTSINPEALALSARYVDYFINEAIERSNETRIKeqnsss---------------------- 59  Diutina rugosa
KAE8170149   494 TFSDNTVLRIFTNESFqsdDVRVAAGVIKSSAEYLRLFTEEAIALAIRQKEEt--------------------------- 546 Yarrowia lipoly...
ODQ72139      18 TFNSKTVARLFAEHFDr-pDTRVSASAVETSAEYLRIFTREAIWRTDKALKDtitaaesgegk----------------- 79  Lipomyces stark...
PSK51979     118 GIPPQLLTRIMHESYKd-kNTKISREANEMMRKYVDIFVREAVARAAESHKEkknkdgitag------------------ 178 Elsinoe australis
Feature 1                                   #####  #   #   # ##
3B0B_C        61 --------------------------lEKVDIEHVEKVLPQLLLDF 80  chicken
3VH5_D        61 --------------------------lEKVDIEHVEKVLPQLLLDF 80  chicken
KAA8898437    65 ---------------------kasttsNIVEASDLEKIKDDLKLDF 89  Trichomonascus ciferrii
XP_018226297  67 -----------------------entqISLGAEDLERIAGQLTLDF 89  Pneumocystis carinii B80
VVT57757     161 -----------------genetdendnRMLQVRHLTKISSDLILDF 189 Saprochaete ingens
QBM90485      81 pdsyddideedrglgvstqmppatdanDALTTRHLAAISGLLVMDF 126 Metschnikowia aff. pulcherrima
KAA8906025    60 ----------------------nirtgNILTEEHLIKNAGTLVLDF 83  Diutina rugosa
KAE8170149   547 --------------------------gETVDSRDLDRVKEELRDGF 566 Yarrowia lipolytica
ODQ72139      80 -----------------qmakisgaraRMMGGEDLERIAGTLVLDF 108 Lipomyces starkeyi NRRL Y-11557
PSK51979     179 ------------------gkgksvqddVWLDIEDLESITPGMLLDF 206 Elsinoe australis

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