5EDV,4KBL,4UI9,5N2W


Conserved Protein Domain Family
BRcat_RBR

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cd20335: BRcat_RBR 
Click on image for an interactive view with Cn3D
BRcat (benign-catalytic) domain, part of the RBR (RING1-BRcat-Rcat) domain
The RBR family of RING-type E3 ligases are characterized by containing an RBR domain, which was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. It is composed of an extended RING domain (RING1) followed by an in-between RING (IBR) domain and the catalytic domain, which is structurally an IBR domain but is commonly designated as RING2. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been changed to RING1-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently, where the IBR and RING2 domains have been renamed as BRcat and Rcat domains, respectively. The RBR domain uses an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase functions to facilitate the ubiquitination reaction. The BRcat domain adopts the same fold as the Rcat domain while lacking the catalytic cysteine residue and ubiquitination activity. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The model corresponds to the BRcat domain.
Statistics
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PSSM-Id: 438996
Aligned: 360 rows
Threshold Bit Score: 29.4288
Created: 6-Dec-2018
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C H CClick to see conserved feature residue pattern help
Evidence:
  • Structure:5EDV; Homo sapiens RNF31 binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #     #                #  #    #  #       #    #   
5EDV_A        101 DPKFLWCAq---CSFGFIYer--eqLEATCpQCHqtFCVRCKRQweeqHRgrsCEDF 152  human
RDD43329     1678 ANQWRFCPtp-rCQSIYKKse--ssEIFTCyLCQkkTCRGCDTGd---HAgfdCNAI 1728 Trichoplax sp. H2
XP_001584898  226 LPNFTFCLnp-tCESGQIHksa-dqPMMTCtTCNfkTCFIHKLPw---HEdltCAEF 277  Sclerotinia sclerotiorum 1980 UF-70
Q0V4X6        381 DPNFEWCRn---CGSGQIHmsgvegNIFTCaACGhkMCIVHKNTw---HEgetCEDY 431  Phaeosphaeria nodorum SN15
XP_001257398  243 DAEFVPCVrk-dCGYGQLHaggledPIVVCgSCGtrTCFIHRDTv--wHEgltCEEY 296  Neosartorya fischeri NRRL 181
XP_001593721   33 QAKFNWCLasnkCYSGQIHeg--gnARMICiSCKesTCVHHQLPw---HEgltCAEY 84   Sclerotinia sclerotiorum 1980 UF-70
XP_001560582  390 PDTFIMCLgp-kCGGGQIHeg--tePLMICdHCQfkTCVKHKLPw---HEglsCDDF 440  Botryotinia fuckeliana B05.10
Q0UBQ8        161 DAQFRYCLsp-sCNSGQVHnsgaegYIFRCvACGfrACTIHDAAf---HEgetCGQF 213  Phaeosphaeria nodorum SN15
Q2HFI8        586 DPAFHFCLsp-aCGSGQMYee--ncPRFECvSCQasSCLHHNLPw---HWdetCQEY 636  Chaetomium globosum CBS 148.51
XP_964661     451 IPNFRWCKss-kCNSGQIDdv--rcVRFKCkACKnsHCIKHDVPw---HSgetCEEY 501  Neurospora crassa OR74A

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