2CNM


Conserved Protein Domain Family
rimI
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TIGR01575: rimI 
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ribosomal-protein-alanine acetyltransferase
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Links
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Statistics
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PSSM-Id: 273701
Aligned: 11 rows
Threshold Bit Score: 168.276
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2CNM_A        11 DLPAAWQIEQRAHAF--PWSEKTFFGNQG-ERYLNLKLT-ADDRMAAFAI----TQVVLDEATLFNIAVDPDFQRRGLGR 82  Salmonella ente...
BAB81872      13 HVKGVFEVSKLSLAE--SWNIDSIEKELS-NKLAKYLVAlHGDKVIGFVG----MWIVFHEGDITNIAVHPEYRKQGVGN 85  Clostridium per...
P09453        11 DLPAAYHIEQRAHAf--PWSEKTFASNQG-ERYLNFQLTq-NGKMAAFAi----TQVVLDEATLFNIAVDPDYQRQGLGR 82  Escherichia coli
WP_010892970  20 HLDKVMEIERRVYCF--PWTRAIFRNCLQ-SGHLALLMKq-GRNMIGYGI----VNITRKEAHLLNICIAPEQQSHGLGR 91  Xylella fastidiosa
WP_003111579  14 DLDAVLKIEYAAFSH--PWTRGIFSEGLK-NYH-CWLMFe-GSQQVGHGV----IQIILDEAHLLNITVKPESQGRGLGL 84  Pseudomonas aer...
WP_002370458  13 IGEELWRFSNSSYTTgsPWTETQFAEDFA-QENSEYLFLvENGQWLGYIA----YHFILDEAEISHVVVNGQKQHQGIGC 87  Enterococcus fa...
WP_010871054  10 DLDAVEEIEREAFKT--P-YPTSLILGFWsMYPNCFYVAeIDGRVVGYIL----GSMDWGNGHIISLAVKKECRGLGIGT 82  Methanocaldococ...
WP_031739687  17 DAQRCAELEAQLFVGddPWPPAAFNRELA-SPHNHYVGArSGGTLVGYAGisrlGRTPPFEYEVHTIGVDPAYQGRGIGR 95  Mycobacterium t...
CAD00154      16 DLKSIMNVENAAFTV--PWTEAAFRNEFIiNQYAYYLLAiYKEQVVGYAG----VWLVLDEGHITNIAIHPDYQGNHYGE 89  Listeria monocy...
WP_000569840  13 lAQDIYAVMAAVYPVs-PWTLEQIQADLS-QDQTWYALAyDGAEVIGFLT----VQETLFEAEVLQIAVKGAYQGQGIAS 86  Streptococcus p...
AIG97615      13 DFKEVLEIDKEAFS---PRNPAYDVYVYI-TYGTDLLVAdIGSKIAGYIVt---MDVDEFTGKIIAFAVRKEFRGMGIGK 85  Archaeoglobus f...

2CNM_A        83 MLLEHLIDELETrg-vVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQghEDAIIM 142 Salmonella enterica subsp. enteric...
BAB81872      86 LLIDNLITLCKEnn-iNSLTLEVRESNIPAQSLYKKHGFKEEGIRKNFYNNPK--ENAIIM 143 Clostridium perfringens str. 13
P09453        83 ALLEHLIDELEKrg-vATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDgrEDAIIM 142 Escherichia coli
WP_010892970  92 SLLRTLIKRSCNsg-aQCMFLEVRPSNTVAIALYHSEGFNEIDRHRHYYPAQNgyEDALVM 151 Xylella fastidiosa
WP_003111579  85 RLLEHLMREAAGhq-aRECFLEVRASNQAAYRLYERYGFNEIGRRRDYYPAVGgrEDALVM 144 Pseudomonas aeruginosa
WP_002370458  88 QLMKAFKEYVKSrd-iTQIFLEVRESNILAQKLYEKTGFRKVAVRKNYYKEPQ--ENAFVM 145 Enterococcus faecalis
WP_010871054  83 ALLKTLENYYFNiancNYIVLEVRVSNVLARRFYYRMGYRDRKLLPKYYEDG---EDAILM 140 Methanocaldococcus jannaschii
WP_031739687  96 RLLRELLDFARG----GVVYLEVRTDNDAALALYRSVGFQRVGLRRRYYRVSG--ADAYTM 150 Mycobacterium tuberculosis
CAD00154      90 ALLREMIRVAKErg-vVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTK--EDALVM 147 Listeria monocytogenes EGD-e
WP_000569840  87 ALFAQLPTD-------KEIFLEVRQSNQRAQAFYKKEKMAVIAERKAYYHDPV--EDAIIM 138 Streptococcus pneumoniae
AIG97615      86 MLLSEAIKRLEGrg-kRKITLEVRVSNVQAQKLYKKFGFEIIDVISGYYSDG---EDAYLM 142 Archaeoglobus fulgidus DSM 8774
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