4P6V


Conserved Protein Domain Family
NqrD

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COG1347: NqrD 
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD [Energy production and conversion]
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD is part of the Pathway/BioSystem: Na+-translocating NADH dehydrogenase
Statistics
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PSSM-Id: 440958
Aligned: 104 rows
Threshold Bit Score: 277.838
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4P6V_D         1 MS-------------------SAKELKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSL 61 
NP_219785      1 MT-------------------TNKSYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSL 61 
NP_224629      1 MT-------------------SKKSYKSYFFDPLWSNNQILIAILGICSALAVTTTVQTAITMGIAVSIVTGCSSFFVSL 61 
WP_012663057   1 MAk------------------EKSNRLDIMVRGIWRENPVAFQVLGICSALAVTVKMSTALVMAVALTVVTACSSFTISL 62 
WP_012506671   1 --------------------mVDKKTLKTLTEPVGMSNPITKQVLGICSALAVTVKMDTALVMSAALIFVLVGSNAIVSA 60 
WP_013181371   1 --------------------mSKPTAVSYFKEQLWHSNQILVAILGICSALGITNRLSVAITMGVSVSLVTACSSFFVSL 60 
WP_013766815   1 MAetmtktaa----ekeklewFGPKERKLITDPLNDDNPVTVQILGVCSALAVTTMLKPALIMAIAVTLVTGFSNLVISL 76 
WP_013942817   1 -----------------------MKLSHYYTDQIWKNNQILVAILGICSALAVTIKVSVALTMGISVIFVTGFSSLFVSL 57 
WP_014798247   1 MAtetaksmeatvvkkksedfFSKRRRRLVADPLDDSNPITVQVLGICSALAVTAKIAPTLVMATAVMIVVIGSNVIVSL 80 
WP_060685379   1 MAetvetaev----kkaaeplFSKRRKKIVTDPLNDDNPITIQVLGICSALAVTTQLEPTFVMAIAVMVVIVFSNLIISL 76 
4P6V_D        62 IRNHIPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKSEPIPSFIDGIGNGLGY 141
NP_219785     62 LRKITPESVRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAESMARHVSPIPAFLDGLGSGLGY 141
NP_224629     62 LRKFTPDSVRMITQLIIISLFVIVIDQFLKAFFFDISKTLSVFVGLIITNCIVMGRSESLARHVTPIPAFLDGFASGLGY 141
WP_012663057  63 LRKQIPSNIRIIVELAIIASLVIITDEVLKAFFYDTSKQLSIFVGLIITNCIVLGRAEAFALANTPGDSFVDGIANGIGY 142
WP_012506671  61 FRNLIPSRVRIIVMLTIIATLVIFIDQLLKAYLFDISKQLSVFVGLIITNCIVLGRAEAFALKNGVWPSMLDGLGNGLGY 140
WP_013181371  61 LRNVTPDSVRMITQLAIISVFVTIIDQFMKAYMFPLSKVMSVFVGLIITNCIVMGRAESMAKNIEPIPAFMDGLGAGAGY 140
WP_013766815  77 MRNGIPKQIRMIVQLVVIAFLVTIVEQVLKAYSYPVWKQLSVFIGLIITNCIVMGRLEAYAMANPPWRSLLDGLGNGAGY 156
WP_013942817  58 IRSITPPNVRMIAQLAIISLFVIIVDQMLKAFLYEMSLTLSVFVGLIITNCIVMGRAESMAKNVSPLPAFLDGLGAASGY 137
WP_014798247  81 LRNVIPGRIRIIAQLAIVAMLVILVDQVLKAYFYDLAKIVGVYVGLIITNCIIMGRLEAFAMGNKPYDSALDGLGSGLGY 160
WP_060685379  77 MRNLIPSRIRIIVQLAVIATLVSLVDQVLKAYFFDVSKMLSVFVSLIITNCIVMGRLEAFAMGNKPYDSVLDGLGSGFGY 156
4P6V_D       142 GFVLMTVGFFRELLGSGKLFGLEVLPLISN----------GGWYQPNGLMLLAPSAFFLIGFMIWAIRTFKPEQVEA 208
NP_219785    142 GWVLVCISIIRELFGFGTILGFRVIPEILYtsa-----ahPDGYENLGLMVLAPSAFFLLGIMIWIVNIIRAPKTKR 213
NP_224629    142 GWVLLVIGVIRELFGFGTLMGFRIIPQFVYase-----thPDGYQNLSLMVLAPSAFFLLGIMIWLVNIRDSKKRKR 213
WP_012663057 143 GLILVAVAFIRELLGSGNIFGIPVIPGFMI----------EAGYQNMGLMVLAPGAFFIIGLLVWLKNSLPGVSHEN 209
WP_012506671 141 GMILLFVSAMRELFGSGTMLGFQIVPDILYve-------nGGWYMNNGLMLLAPGAFFVLGLLIWLQRTLTGYTEE- 209
WP_013181371 141 MLVICAVGVIREVFGFGQLLGYQVIPQSWYatp-----daPFGYENFSLMVSPPAAFFIIGGFIWLYNIASGEKHS- 211
WP_013766815 157 GLILIAVAAIREFFGRGALMGYKILGATDEfllntskhwwLSWYQPNGLMVIPASAIFLVGIFIWIQRSRNPKLVDV 233
WP_013942817 138 ALILLIVGVIRELFGFGSILDYPIIPESWYasp-----ehPDRYVNSNLMALAPSAFFIIGAIIWMRNVLTKEEDL- 208
WP_014798247 161 AWVILVVAFFRELFGSGTLLDIPIIAPINEa--------lGVSIPNNGLMTNPVGAFIVIGIIIWVQRYFNGYVEDH 229
WP_060685379 157 AWIILAVAFFRELFGSGSIFGFKVFEAIGL-----------PDFPLNGLMVSPVGAFMVLGLIIWVQRAYTGYVEK- 221
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