1NMN


Conserved Protein Domain Family
RuvX

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pfam03652: RuvX 
Holliday junction resolvase
The central intermediate formed during mitotic and meiotic recombination is a four stranded DNA structure, also known as the Holliday junction (HJ), and its efficient resolution is essential for proper segregation of chromosomes. Resolution of HJs is mediated by a diverse group of DNA structure specific endonucleases known as Holliday junction resolvases (HJR). This entry is specific for RuvX also known as YqgF a family of nucleases which resolves the Holliday junction intermediates in genetic recombination. Studies carried out in M. tuberculosis, have shown that YqgF/RuvX is a genuine HJR analogous to RuvC from E. coli. Furthermore, a single cysteine present in M. tuberculosis RuvX was found to be required for disulfide-bond mediated intermolecular dimerization and HJ resolution activity, suggesting that M. tuberculosis RuvX has adapted its YqgF protein to function like a typical RuvC family HJR.
Statistics
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PSSM-Id: 461005
Aligned: 112 rows
Threshold Bit Score: 55.2077
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NMN_A              3 GTLLAFDFGTKSIGVAVGQRITGt-ARPLPAIK-AQDG-TPDWNIIERLLKEWq--PDEIIVGLPLNM-DGTEQPLTARA 76 
Q6F101              2 SNILGLDVGSKTIGLASSTG--Nv-AKKEINLKfEEWNfEEGVSLLTEFIKDKs--FDTFVFGYPKNM-NGSIGERAEMV 75  Mesoplasma...
Q9PQC1              1 MRKLALDLGTKSCGFAISDLLGIi-ASGLDNFIyEENDfTAVLAKIDEIMINYhheIDTIVLGYPTNVyDGSKNERTYLI 79  Ureaplasma...
A5IYK4              1 MRKLSFDLGTKTCGFAISDILEIs-ANALETIRfVENDfNAVIVKVKEIIKMYqnsIDAFVLGYPLRS-NGSKSERTMMV 78  Mycoplasmo...
Q98Q13              5 MRKIALDLGTKSCGFAISDPISNsfAIPLENFFfEENNfKKVINKLKHYEKKYe--FDTIILGYPLRM-TGTRSERSIMV 81  Mycoplasmo...
Q6KHK6              1 MRKLGIDLGKIRTGFAISDDSNKi-SLPLKTFIqKNANfNNIILEIKKILLEYq--IDTIVIGLPIKI-NNEKTKSTIFV 76  Mycoplasma...
Q4A632              1 MRKLGIDFGLSRIGFAISDESNSf-SLALENFDyDGSY-EKIIQKIQLFLDEYk--IDKFIIGYPLNS-RGEKTKTCLLI 75  Mycoplasmo...
Q30T74              1 MKYIAIDLGLKRIGLAYSAHKDLv--TPLKAVE-RKNR-DQAARDVKKTLIEWe--VDAVVVGIPLGG--SSEDEMRRRV 72  Sulfurimon...
tigr:CHAB381_0377   2 EISAGLDVGLKRIGVALAFDKIVm---PQNAVI-RKNR-NQAAREISEILQQNg--VKKLVVGIPLGG--SSEDEMKRRI 72 
Q7VGU1              3 HCILACDVGLKRIGLATLKQEIIl---PLPPII-RINR-NQAAKELDNVLKERn--IHILVVGMPSGG-EAEHSDTQKRI 74  Helicobact...
1NMN_A             77 RKFANRIHGRF----GV---EVKLHDERLSTVEARSGLFeQGgyR-----ALNKGKVDSASAVIILESYFEQ 136
Q6F101             76 DYFIEGF-MVYn--pEIkeeQIIRIDERRTTKMAKSIMIeAGlsR-----QKQKENKDTLAAQLILETYLEK 139 Mesoplasma florum L1
Q9PQC1             80 ESFYALLKQHflnheKI---KIVYEDERFSTKIATQRLKnSCvkA-----AKIKKVKDKMSAVVILESYLSK 143 Ureaplasma parvum ...
A5IYK4             79 DNFAILLANEFp---GI---NIYLVDEYGSTIKAQRILKdAKlsN-----KKTKSKKDTVSAVIILNDFLQY 139 Mycoplasmopsis aga...
Q98Q13             82 EEFEKLLRKTF----SQ---RIVLVDERLSTVKAKAMLKeTNisQ-----SKIKEKKDSMAAALLLNYYLNN 141 Mycoplasmopsis pul...
Q6KHK6             77 ENFKKHLEKEI----NL---PIFFVNEYNSSVLANLSI--NEmkS-----KKRKTIVDKISAQIILNDFLNN 134 Mycoplasma mobile ...
Q4A632             76 DEFIIHLEKNF----DQ---KIKLINESYSSRKASEILHqANikN-----KKQKDKKDMLAAKIILQDYLDL 135 Mycoplasmopsis syn...
Q30T74             73 AHFMNLVAFEG---------EIFYQDESNSSIEAESMM--RGeiK-----YIRDGRIDSISAMIILQRYLRQ 128 Sulfurimonas denit...
tigr:CHAB381_0377  73 THFCSLLNFKG---------EIIFMDESYSSVEADEMRqf---sG-----KKKDGKLDSLAAMVILKRYLGA 127
Q7VGU1             75 SHFISLLSFEG---------EICFVNEDYTSFNALQSL--SYmkRqnrarAQKDGRIDSLSACEILQRYIQS 135 Helicobacter hepat...
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