3CDI,2B8K,2IX1,1GO3,2KHJ,2K4K


Conserved Protein Domain Family
S1

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smart00316: S1 
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Ribosomal protein S1-like RNA-binding domain
Statistics
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PSSM-Id: 197648
Aligned: 235 rows
Threshold Bit Score: 29.4939
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3CDI_A     626 EVGRVYTGKVTRIVD--FGAFVAIGg-GKEGLVHISQIADKR--------------VEKVTDYLQMGQEVPVKVLEVDRQ 688  Escherichia coli
O06747     165 LMNKELTGTVYRLIA--SGSFVITDd-GIRCFIHPSERKEE----------------------PRLGSRVTGRVIQVKED 219  Bacillus subtilis
O23308      83 ARGDILQGTVKKVLW--NGAFIRSGp-LRYAYLSLLKMPHYHyvhsplsedekphfQKDDLSKIAVGVVVRFQVLAVRFK 159  thale cress
O67311      39 RTGAFLKGLVKKECPalDGFFLDVGl-TKEALLQEKKNCKN----------------------LRIGDSVIVQLKRKERD 95   Aquifex aeolicus
EDZ69994   254 VKSTSIQCAVKSIED--HGATLDVGlpGFTGFIAKKDFGNF--------------------EKLLPGAVFLGNITKKSD- 310  Saccharomyces ce...
NP_498398  164 AAGLVLHTAVVSIEE--KGAILDVGldQITGFIEKSQFPAAG---------------------LKEGMPLIVRVLSSTS- 219  nematode
NP_498398   70 IEGLTGFGVVSEVFD--DGVLLHTAg-THTVKIHASEVSKKFtelf-------neeKIEIKNAFQLGQMVPFRVISKKQG 139  nematode
NP_587890  224 VAGSMIQAVVSSIED--HGIVFDIGinNYTGFLSKKHINDFP---------------------FVEGQSLLCSVISKED- 279  Schizosaccharomy...
XP_508013  185 KPGMLLTGTVSSLED--HGYLVDIGvdGTRAFLPLLKAQEYIr-------------QKNKGAKLKVGQYLNCIVEKVKGN 249  chimpanzee
NP_439978   33 QVGDIYLGLVDNILPsiDAAFINIGdtEKNGFIHVSDLGPVRlr----------rtAGSISELLSPQQRVLVQVMKEPTG 102  Synechocystis sp...
3CDI_A     689 ---------GRIRLSIK 696  Escherichia coli
O06747     220 ---------GSVNLSLL 227  Bacillus subtilis
O23308     160 erphkrrndYYVLATLE 176  thale cress
O67311      96 l--------KGAKVTCK 104  Aquifex aeolicus
EDZ69994   311 ---------RSIVVNTD 318  Saccharomyces cerevisiae AWRI1631
NP_498398  220 ---------RVVKVTSF 227  nematode
NP_498398  140 nd------kGKVKGTCN 150  nematode
NP_587890  280 ---------RIFHLSLT 287  Schizosaccharomyces pombe 972h-
XP_508013  250 g--------GVVSLSVG 258  chimpanzee
NP_439978  103 n--------KGPRLTGN 111  Synechocystis sp. PCC 6803
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