5MQ8


Conserved Protein Domain Family
Rae1

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COG3688: Rae1 
EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 442904
Aligned: 188 rows
Threshold Bit Score: 90.3044
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5MQ8_A         2 DILLVDGYNMIGAWPQLK-DLKANSFEEARDVLIQKMAEYQS--YTGNRVIVVFDAHLVK---G-LEKK-QTNHRVEVIF 73 
WP_083768843  11 SRMIVDGYNVIRCDPYLR-SIERDGADKARLQLVQLLGKASK--LAAYQIVVVFDGPPSR---GfKPNN-----KVKVIY 79 
NP_712438      3 FQVAIDGFNLIYKFPDLEeSMYQNRLSDARRTLLEWIELYSKk-KKKQNFHIFFDGKKEI---GnEVLQ-ETFGKLNVYY 77 
WP_013944657   1 MNYVIDGYNLFFHIEDE-----ANPLEKKRDLFIAALHDALA--ELQLHATLIFDSHQSH---AaVFPTkKDLVALEIIF 70 
WP_014559921   2 IHYIIDGNNLIGKITSLN-SLP--DKQMARHKLSLMLERYFQ--KKKVKVSLHFDGFENEp---------IKVSGIKIHY 67 
WP_014809152   1 mSYLIDGNNVMDQAGTL-----DQDLSFARKRLINELVRFVA--AKRVKIRVVFDGIPEE---DfPEG--RSYKSVKILY 68 
WP_082121487  22 VRYIVDGYNVINASDIFK----ASTLEGRRDKLFEFINQNRPhgSFKNSITVVFDNKSKNpydFcGHNK-SHLGNIEIIF 96 
WP_076349427   1 MHWLIDGYNVMHAAGAVDgKSGRARFRIARRRFLNELADGLG--ALVHETTVVFDASRPP---GdFPVE-SVYKGITVIF 74 
WP_115585526   1 MIIIIDAYNLLKTVLHTQf-----VQDAQRTKFLQLFEKYAQr-RNSNEVILVFDGGQDP-----YEVE-ENYKYLTLFY 68 
WP_128699249   3 LFYIVDGYNVIKRSGPFc----DLPLRQARERFFMFLESSRPhgSVRNRLAVVFDGSAQVfg-------fKESRTFEIIF 71 
5MQ8_A        74 TKENETADERIEKLAQALNnIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRV----R------KIT 143
WP_083768843  80 SGR-DSADDLIVNMAKS------DDLVVTNDSQLRARTLQRGPKVWSVEKLLDTIRPRSRGSRKYS----P------QSD 142
NP_712438     78 S-RDRKADDLIKEFVRTQI-RPADVQVVSSDKEIFYHAKKWGAHPITSEEFASIVTAEIFPSKQKT-------------- 141
WP_013944657  71 SPEGLSADEYILERLRAEK-KPQLQIIVTSDRELIRHAKHLGAKIKTIESFFEMIARRHAKKSQKG----E------EK- 138
WP_014559921  68 S-QNRSADEVIKKEIETIN-NRNSVYVISSDIEIISFAKVCGCKVLKSEEFYKLTINQNKQEEEKP----S--------- 132
WP_014809152  69 ARPGSDADSRIKDIIRKSS-YKRDMTLVSSDKELGVFARRQGTRVISAGQFRSMLRETSEQPDTVG----D--------- 134
WP_082121487  97 SDGVDLADDIIAQIVDESS-NPYEITVVTNDKGIRRRTAPAGAKHESVESFLAKGFKQKNIKRASE-------------- 161
WP_076349427  75 AVADEDADARIERIIAHHS-NPKALTVVSTDRRVRLAATRRKAHALRADDFLDRITTLAHERPKPT----A------ADK 143
WP_115585526  69 SGFMQSADDIIKKKLTTY--KAFDILLVTSDRELRNYAKQYQIESLGSMEFYRILQEVMKVQDQKEliiaQtihkttQE- 145
WP_128699249  72 T-TGESADEKIKEMVRADR-DPRNIVVVTDDRELGYAVRCQGARVIVCADFLKSSGTAKRRGRSVA-------------- 135
5MQ8_A       144 s--EKPAGKI------------------ALSEEVL---------KTFEKWRRGD 168
WP_083768843 143 pkpSKAGVSKlr--------------sfSVCKQCIfftrddwimLCVEDLEIGT 182
NP_712438    142 ---DLEELKDk-----------------KLSSEELe--------YWKNLFRKGK 167
WP_013944657 139 ---MQRESSHhf---------------dRLHEAFE------------KKLREES 162
WP_014559921 133 ----------------------------NFDTDEF---------KRLFGIE--- 146
WP_014809152 135 ----------------------------TCCPEPVnv------dEWLDFFEKTK 154
WP_082121487 162 ----------------------------VLSGDVKee-----inEEFEKLWIKK 182
WP_076349427 144 p-dAKPPAAL------------------MDDAEKA---------HWMQVFGSID 169
WP_115585526 146 ---ENKSLDTlmeygsrylitkdqdkdvKLSLRYTdeq---ngsKKDKKLLKKI 193
WP_128699249 136 ---QEADLKN------------------VLNIVQRek-----itQELKGLWLKE 163
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