1V8P


Conserved Protein Domain Family
VapC

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COG4113: VapC 
RNA interferase (RNase) VapC, contains PIN domain [Defense mechanisms]
Statistics
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PSSM-Id: 443289
Aligned: 316 rows
Threshold Bit Score: 49.5182
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1V8P_A        30 YLVDASALYALAAHYDK-------WIKH-Re--kLAILHLTIYEAGNALWKearlgRVDWAAASRHLKKVLSs-----fK 94 
WP_015883891   4 VVMDTSALLRLVHPEPGhdlvcalWNRAd----sVVASRLADAELRAVLEAgrrtgHLSEAARDAALERWAEcrd--svR 77 
NP_217901      4 IYLDSSAIVKLAVREPEsdalrryLRTRhP----RVSSALARAEVMRALLDkgesaRKAGRRALAHLD------------ 67 
WP_083888153  17 KFYNTSVLVPFYLPEALsdavdelLRie----dtPALSQLVEVELFSAVARklrmrKISPEEARQIALDFQTdldenfyT 92 
WP_015257562   2 FYADTSAVLPFYRSEPAsdtieqlLLVqr---qpPVISDLVRVEFASALARwvrmeELDEAQANRIESAFHEdvregryR 78 
WP_058021820   2 FYFDTSALLPYYRQEAAservqalLMSqq---qpVLISHLTQVEVASALSRwirmgELTESQANRIESTFSDdirqkrfV 78 
WP_063464605   2 LYFDTSALLPYYREEQAseqvqnlLLRqs---npVLISHLTEVEVASAVARwvrmgELSEPEANRIESAFGDdvrqgrfV 78 
WP_066640874   2 LYVDSSALLKRVFAEVAsdvvrdvIAQRhAvedvVVSSELAWLEVSRALLrae-vgQVDDLVDLACSG------------ 68 
WP_100918110   2 VYLDTSAAVALFVPESAseqvaawFAACae---qVVAADWILTEFASALSLkqrrgEIKAEDAQVLWSEFKAfcg-tglR 77 
WP_102115333   3 LYLDTSILVTVFTPEPEtpkvqnwLEARmAe--hLVISDWVITEFSAALSLklrtgQVSGDQRARALNLFNRava-dniS 79 
1V8P_A        95 VLE--DP-PL-DEVLRVA--VERGLTFYDASYAYVAESSG-L--VLVTQDRELLAKTK 143
WP_015883891  78 VVE--VTpELaDTAGDLA--LRHGIRAGDAVVLAGALLLApVdpVLAVWDGRLADAAR 131
NP_217901     68 LLR--VDkRVlDLAGGLL---PFELRTLDAIHLATAQRLGvDlgRLCTYDDRMRDAAK 120
WP_083888153  93 RIP--LEpIHyNLARDWIsrFEVPLRTLDALHLAVASSNQ-L--LLVTGDEALARSAR 145
WP_015257562  79 LVA--LDpGVfARAMHWLltRHTRLRTLDALHLACAEASE-A--PLLTLDQALLASAE 131
WP_058021820  79 RTS--IEaADyERATHWIsmYNTRLRTLDALHLACAERNR-A--CLISQDKALVKAAL 131
WP_063464605  79 RCP--IDiMHyQRAIHWIgiRKTSLRTLDALHLACAEYYQ-A--RLITEDDALLSAAL 131
WP_066640874  69 IARhpLSsPVlDRARRIG---PSQIRSLDAIHLAAAVTLGaE--EMLTFDHRLAEAAQ 121
WP_100918110  78 LIP--VTrVAfEEAARMVrdADSGLRAGDSLHLAVALEVGaT--RLVTTDATLAVNAT 131
WP_102115333  80 IAP--VVqKHfTLATRFAnqASSGLRAGDALHLAIAADIG-A--VLCTRDRRLLEAAI 132
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