1OYP,1UDN,3B4T


Conserved Protein Domain Family
Rph

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COG0689: Rph 
Ribonuclease PH [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440453
Aligned: 519 rows
Threshold Bit Score: 306.571
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1OYP_A         1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGG--KGWITAEYSMLPRATNQRTIREs 78 
NP_295308      7 PVREGRDALTPRPVSVQRGVNPHAPGSAHLKMGRTEILATVTLDDKPAPHMRGKK--EGWLTAEYSMLPRSTTDRQARE- 83 
WP_011956733   2 VRNDGRAPADLRPVRITIDTYGYAEGSALIEMGNTRVLCTASVEEGVPQWLRGQQ--RGWVTGEYALLPRSTAQRTRRE- 78 
WP_015942337   2 VRRDGRAPDQLRPITIEIGAAPYAEGSALIAYGNTRVLCTATIEDGVPAWMRGQQ--GGWVTAEYAMLPRATLQRSRRE- 78 
WP_012240584   2 NRPDGRALDVHRPVEMILGFHRNAEGSVLYRAGRTVVLCTASVEPTVPAWMMGKG--AGWLTAEYQMHPRSSPARREPRd 79 
WP_013157652   2 NRKDGRAPLEMRPLSIHTGYNLYAEGSALVELGHTKVLVTVSLTDGVPRHVRP-R--EGWLMTEYNLLPRSTKERKERE- 77 
WP_013176997   1 -MRKGRQPFQLREIRVTPGYNRFAEGSALVEWGDTRVLATVTVENKLPPHLRGKKgrVGWLTAEYAMLPRSTAERTQRE- 78 
WP_013703191   2 NRKDGRGPLEMRPLVITPNYNAFAEGSALVELGQTRVLATVSITDGVPRHVHPRR--SGWLMCEYSLLPRATPTRTQRE- 78 
WP_053235003   3 SRTDGRSADALRPVTIETGVQRNPEGSVLYACGGTRVLIAASIDEGVAGWLRGSG--KGWVTAEYAMHPRANPQRQDRDg 80 
WP_050429108   2 NRLDGRAADQPRPVEVTTGFQRNAEGSVLYRAGRTVVLCTASVDPTVPPWMAGKG--RGWLTAEYQMHPRSSPTRRESRd 79 
1OYP_A        79 sKGK-ISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTIKTNPITD 157
NP_295308     84 -RNL-QNGRRHEIQRLLGRALRSSMDLRPFKNQTLYVDCDVLVADGGTRVASVLAGHAALHDFCDRLINSGQLSEWPIVH 161
WP_011956733  79 -RNG-VSGRTQEIQRLIGRALRAAVSLEALDGFTVTVDCDVLQADGGTRTASITGGYVALALALHRLTAEGRLASNPLQR 156
WP_015942337  79 -RNG-PSGRTQEIQRLIGRALRAAIDLHAIGERTITIDCDVLQADGGTRTASISGGYVALALAVDHLVRSGAVETYPTLT 156
WP_012240584  80 gRGKaPSGRTQEIQRLIGRALRAAIDLKHLGEQTIAIDCDVLEADGGTRTASITAGFVALALALDRMRAAGSLEAPVLRD 159
WP_013157652  78 -RQK-LSGRTAEIQRFMGRAFRAVLDLSSLPGKTVVIDADVLQADGGTRVASLIGGYAALHQALDKMVRSGALDEWPLQ- 154
WP_013176997  79 -RLY-AGGRSLEIQRLIGRSLRSVTDLTLFHGQTLTVDVDVLQADGGTRCAGILAGYAALHHAAGRLVRKGALDEWPLTH 156
WP_013703191  79 -RFK-LGGRTQEVQRFLGRAFRAALDLKALAGKTVIVDADVLQADGGTRVASILGGYAALFLALDRMVRDGTLDDWPLL- 155
WP_053235003  81 rKGR-IDGRTQEIQRLIGRSLRAAVNLEKLGERTITVDCDVLDADGGTRTASITGGFVALALALDRLRSKGVIGAGVLRG 159
WP_050429108  80 gRGKaPSGRTQEIQRLIGRSLRAALDLRRLGEMSITIDCDVLEADGGTRTASITGGFIALALALSRLHGSGLLTEPVLRD 159
1OYP_A       158 FLAAISVGIDK-EQgILLDLNYEEDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEV 236
NP_295308    162 NVGAISVGLIG-DE-LRVDLDYEEDKVARADLNVIATDTGLLVEVQGGAELGPITVDEYTRLLSCGVASVQDVMRELTPQ 239
WP_011956733 157 AVAAVSAGYVA-GC-ALLDLDYSEDSVADMDCNLVLTDDGAIVEVQSTAEARAVSRAEFDALIDLATDGIRRLLAIQRAA 234
WP_015942337 157 PLAAVSVGMIQ-DT-LLLDLCYEEDSQADLDCNVVMNINSAFVEVQATAERTPVSRAQLDALLDLAARGIQQILATQAAA 234
WP_012240584 160 QVAAISVGHLP-GG-LALDLVYTEDSSARVDMNVVATAVGSIVEVQATAEDEAIPRAELDRMTDLALAGVASLASAQHRA 237
WP_013157652 155 EFAAISLGWFGeER-ILLDLTHVEDENAWADLTVVATQGGEVIEVHGGGEGRAVPQPVYKQMLETGLGFIPELVRRIHQA 233
WP_013176997 157 EVAAVSVGVVR-GE-TLLDLDFHEDAAAEIDLNVVATADGKLVEVQGSGEERPIDAGRYVELVAQGISAVQGLLAHVRGS 234
WP_013703191 156 EFGAVSLGWFGeDR-VLLDLTAIEDENAWADLTVVATRDGELIEIHGGGEGRPVPRAVYERMVAAGLEVIPSLVAAVHRA 234
WP_053235003 160 PVAAISAGIVG-PS-ALLDLAYVEDSKADVDLNVVAMGDGGIVEVQGTAEGAPVPRDRWTALVDLAMSSMPSLFASQSEA 237
WP_050429108 160 QVTAISVGHLE-EG-LALDLVYTEDSTARVDLNLVATPRGGIVEVQATAEDEAIPRHEMDRMIDLGFVGVRALAKTQLEA 237
1OYP_A       237 LG--D 239
NP_295308    240 LAviQ 244
WP_011956733 235 LA--P 237
WP_015942337 235 LA--T 237
WP_012240584 238 LS--S 240
WP_013157652 234 LS--- 235
WP_013176997 235 FT--- 236
WP_013703191 235 VS--K 237
WP_053235003 238 LA--R 240
WP_050429108 238 LA--H 240
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