Conserved Protein Domain Family
biosn_Pnap_2097

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TIGR04099: biosn_Pnap_2097 
probable biosynthetic protein, Pnap_2097 family
Radical SAM family TIGR04043 is a marker for a widespread eight-gene probable biosynthetic cluster of unknown function. This protein family occurs only in the context of TIGR04043 member-containing biosynthetic clusters, although in a minority of such clusters. This protein family belongs to the TIGR04098 domain family, which also includes N-terminal domains of several probable polyketide synthases. A role in biosynthetic processes is suspected.
Statistics
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PSSM-Id: 274981
Aligned: 11 rows
Threshold Bit Score: 266.544
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05781109   20 LGMQQLGPHGLSEQWLLGFCGDLHWGLIAGALGQESLRFRTADGRPLYAAFCATRLDLAPTDPLL-GEALEIRSDLAVAG 98  Citreicella sp....
WP_011615420  10 AGMPQLAYTGLSENWLLKTCGDLHWRLLAAGAGLGVPDFRDAEGNPVYAAFTAIRVRDAAPQTVGeHAGFSIGSHIVPAG 89  Cupriavidus nec...
WP_012403852   7 AGMPQLSYTGLSENWLLKECGHRHWEALAAHAGRAQPHFHDDNGGRSYAAFTAIRLQTCGLDSIAeNDAFEIRSTLCRTG 86  Burkholderia ph...
WP_011801484  17 AGMPNLCYNGLSENWLLKECGHRHWLAIAQAQGSQQPEFRDAQGRKVYAAFTLVRLSDARLEQIGeHDAFSITSQCLPVG 96  Polaromonas nap...
WP_011880185  10 AGMPQLAHTGLAENWLLKECGQRHWDALAAYSGRDAPEFFDDDGRRAYASFVAVHVDMSRRHAIReNDTFALHVALHRVG 89  Burkholderia vi...
WP_012168596  29 VGMPHLGFGGLSETWLLKECGHRHWLALAQAAGQRVPDFRDATGAPVYAAFCGVSLANARLDRVAeNDTLIFASTLARIS 108 Azorhizobium ca...
WP_013168491  25 LGMPQLSLSGLSESWLLKDLGHRHWMLLARLAGRAVPDFRDADGAPVYAAFCALSVKDADFAALGeNDRLTIVSDISRVS 104 Starkeya novella
WP_012649746  30 LGMPQLTPFGLSETWLMKELGHRHWLLLARRMGMDDADFRTADGTETYAAICATSLTNAQLDRARpNQVLSIQSVLEPVS 109 Agrobacterium t...
WP_012591011  24 LGMPHLSLGGLSETWLLKELGDRHWMLLAKLAGREIPDFRDESGARVYAAFAAVSIREASLASFVeHDELVIESEITRIS 103 Methylocella si...
WP_015918628  11 IGMPHLTPHGLSETWLMKELGHRHWLMLARDLSMDNADFGTADGEEVYAAICATSLTDARFELVRaNDILTIQSLISAVS 90  Agrobacterium v...
WP_012754251  22 LGMPHLCPSGLSENWLWKELGHRHWGLIATAFGRAEAGFGPAGEPPVYAAFRRISLQGGDLGSVReNDALEVRSTVTYLS 101 Methylobacteriu...
ZP_05781109   99 GARLGSRHLFLHRGREIGALRMLSTFVAHDETGSN---RRIVRALParnCALPMAEPG--------LMALDARARDTSRA 167 Citreicella sp....
WP_011615420  90 GVKHLSEHAVDMHGDCRASVTMLSTFIRRTRDRDN---RSVVRTMPtvaAQWAGAGPSaqa---aeLSLLARRFRGGDWG 163 Cupriavidus nec...
WP_012403852  87 PVRHFSTHYIVRDDLKVAEIEMASAFVTRGEARNNrsaARAALSSL---AGEIVPMPEea----ldMTQIGKRLRAYDRD 159 Burkholderia ph...
WP_011801484  97 RAQHYSRHDLRVHGQRGARVEMLSAFVRREKPGNN---RSVVRAAMtesKVNHDAMDQelataadaFVRHGRERRAGAWS 173 Polaromonas nap...
WP_011880185  90 PIRHFSEQRIRHGDHEAGVVRMMSTFVTREHAGSN---RSVMKARMtgvDGRTGPVPAda----laMAERGKKLRTRDAS 162 Burkholderia vi...
WP_012168596 109 ATQFVSRHSVRAPDGVVAELELVSVFVKRQVEGRN---RSVARVRP---EGLPPLDPGev----srTSALAAALRGGEWD 178 Azorhizobium ca...
WP_013168491 105 RTQSASRHRLSVAGKPVGEVELVSAFVRRASGGGN---HTVARVAL---DAFPPPTAPrt----dgLASLAAELRAGRRE 174 Starkeya novella
WP_012649746 110 KTQVASRHRLLVDGEPIGDVELLSAFVRRTRENDN---VSIARVEL---PG-THRFPVrle---ntLARIASDVRNGRCE 179 Agrobacterium t...
WP_012591011 104 GAQFASLHRLSRRGRPAGVIELVSVFVKRRVAGRN---RSIMRTAL---DCFPPPEAAgps---ftAAATAARIRAGAFE 174 Methylocella si...
WP_015918628  91 RTQTSTTHLLSIAGRSVGRIELVSAFVHRAVQGSN---RSIARVTA---P-RPQTRPYev----slLAQHAAHIRNGRLQ 159 Agrobacterium v...
WP_012754251 102 ETRVVSRHVAACRDRLVADVEMASVFVRRQAEGVN---RSIARVRI---EGRGHAKPV--------LAAMPIQPSITEHE 167 Methylobacteriu...
ZP_05781109  168 L-------RGRTVPL-AGaQRIEPCHGLDFNAVGLLYFPSFTRLVETA------ARTTAP-----IRMRELVYLGNLDAG 228 Citreicella sp....
WP_011615420 164 Mhlg--ldQARHRVC-HA-AEYLPCPCNDFNGADLLYFASFQAMVDRAewq-wrRDADPPt----VFARDLFFHGNVNVG 234 Cupriavidus nec...
WP_012403852 160 Avpd--lgPATLEPI-----EFFPCPNSDFNGADFLYFASYQAFVDRAewq-wrRFGEPPv----VSSRSLFYYGNVDVG 227 Burkholderia ph...
WP_011801484 174 Eppg--vhSGEGGAGmHE-SVFMPCPNNDFNGADLLYFASFQAVVDRAews-wmVNAQPPgrpaaIIEREMVFYGNMNLG 249 Polaromonas nap...
WP_011880185 163 Ivpa--laGLAEDDG-AS-VSFLPCPNMDFNGADLLYFASFQAFVDRAewq-hyRFAHAPv----LAARQLYFHGNLDIG 233 Burkholderia vi...
WP_012168596 179 Thmg--faRTQAHEC-AR-VMLTPCPSQDFNGAHFLYFAAFQAFADRAewe-llAPPAGTl----TLARDLVYHGNIEPG 249 Azorhizobium ca...
WP_013168491 175 RhfgfdlhAAEAETS-AA-FEIDPCPAQDFNGAGFLYFSSFVAFVDRAewhfdgRRAERAt----TLARDVFFHGNVDPG 248 Starkeya novella
WP_012649746 180 Thlg--maVGDRDVL-RD-FRFQPATTQEFNGAGLLYFVHFQAFVARAles-wfPDGAFRn----ITRRDSFFLGNAGIG 250 Agrobacterium t...
WP_012591011 175 Qhfg--fsRSDSREI-GR-LLINPCPSQDFNGADFLYFTSFQSFVDRTewe-llAPERGLs----TQARDIVYRGNIEPG 245 Methylocella si...
WP_015918628 160 Tywg--lpLDAAEAL-RT-FRFAPSTAQEFNGAGLFYFAEFQAVADRAlea-wfPGRKPAv------RRDIFFLGNIDPH 228 Agrobacterium v...
WP_012754251 168 Flga--vaAPEEREL-GT-LVVEPCPHLDFNGAGLLYFSSFVAAVDRAewrflgSRSGNYa----TRVRRALFHANVEMG 239 Methylobacteriu...
ZP_05781109  229 TAVHVLRAGRE---------TLVARD-DGSLIARAVE 255 Citreicella sp. SE45
WP_011615420 235 ESLELIFSALRedeeglthwCEIRRSrDGEKIADVVT 271 Cupriavidus necator
WP_012403852 228 DTLTVHMVGLAqdgegirhwTEVRRNsDGTKIADVTT 264 Burkholderia phymatum
WP_011801484 250 DSVRTSLGVHDsggmhlshrSELRRGsDNARIAEVYT 286 Polaromonas naphthalenivorans
WP_011880185 234 DALTVRFVRAGpdtggllywSEILRDsDGTKIADVIT 270 Burkholderia vietnamiensis
WP_012168596 250 ERLAACLLGVRetpgelahwLRLARE-DGTPLADIFT 285 Azorhizobium caulinodans
WP_013168491 249 ERLRVRWLAARrgegrlvhrCLLERAgDGARLAEAFT 285 Starkeya novella
WP_012649746 251 EPLSVELTAMDrrtm--svaCNLRRs-DGDLIGRVFL 284 Agrobacterium tumefaciens
WP_012591011 246 DKIVVMLSAIRqgegtlahwSQITRDsDGAHLADIFT 282 Methylocella silvestris
WP_015918628 229 ETVSFDLMGWSddhd--ilhGKLRREs-GDLIATIFM 262 Agrobacterium vitis
WP_012754251 240 DGLLVRMLASGdeas-cchrALLSTE-DGKLLAEIVT 274 Methylobacterium extorquens
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