4AJ5


Conserved Protein Domain Family
SKA2

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cd12955: SKA2 
Click on image for an interactive view with Cn3D
Spindle and kinetochore-associated protein 2
SKA2, also called FAM33A, is a component of the SKA complex, which is formed by the association of three subunits (SKA1, SKA2, annd SKA3). The SKA complex is essential for accurate cell division. It functions with the Ndc80 network to establish stable kinetochore-microtubule interactions, which are crucial for the highly orchestrated chromosome movements during mitosis. The biological unit is a W-shaped homodimer of the three-subunit complex. SKA2 has also been identified as a glucocorticoid receptor-interacting protein and may be involved in regulating cancer cell proliferation.
Statistics
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PSSM-Id: 214020
Aligned: 7 rows
Threshold Bit Score: 138.734
Created: 18-Oct-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:SKA1 interface [polypeptide binding site]
Evidence:
  • Structure:4AJ5: Interface between SKA1 and SKA2 in the human SKA complex structure, contacts at 4A.
  • Comment:The SKA complex, essential for accurate cell division, is formed by the association of three subunits (SKA1, SKA2, annd SKA3).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #  ## ##  #  ##  #        #        #   #  #   #   #   #  ##  #   #  #
4AJ5_K         7 VDKLELMFQKAESDLDYIQYRLEYEIKTNHPDsa--sEKNPVTLLKELSVIKSRYQTLYARFKp-VAVEQKESKSRICAT 83  human
AFJ51514       5 VTTLETMFQKAESDLDYIQTTLEFEMMKQLPNgl-akEENPLVLIQQLSVVKSRYKSLCEQLEk-ISAEQQESTRVVRAT 82  eastern diamond...
Q0P426         4 VDKLEAMFQKAEADIEYVEKRLKFDFMASAREag-tfEGNPVELLEDLSAIKARHAALCAQVEe-IAAEQKRSMDSIRAH 81  zebrafish
XP_003460215   5 VEKLEAMFLKAEADLDYIEKRLKLDFINSSAEngcpaENNLAVVLENLKAIKSKHSALCSQVKe-LTSAQKESVDSIRNN 83  Nile tilapia
XP_003725973  16 VDKLEAMFQKAESDVEYMSRKVESEFQEGAQEk---dQTSPLELSQRLQQVKHDYKSIMEEAQg-IKKAQEEMVSGIKQQ 91  purple urchin
XP_003780056   1 MSTLQLMFHKVDSELDYIQHRLXYEMKTNHPDwa--gEKNPVTLLKELAAIQPXHQTMSAVFSqqMPTTEQEAKCLVCAA 78  Sumatran orangutan
XP_002736818   5 VDKLEALFQKAESDINYVSRKLDSEFTEMSDEs---nQVNPKEIVERLQSVKQQYSDIVKEAEe-IKKAQSEASEFFRSQ 80  Saccoglossus ko...
Feature 1        # #   #                                
4AJ5_K        84 VKKTMNMIQKLQKQtDLELSPLTKEEKTAAEQFKFHMPD 122 human
AFJ51514      83 LAKTMRLVQEIQQQtGTEISPLSEEEQRAMQRLMYQTPE 121 eastern diamondback rattlesnake
Q0P426        82 LDTTVQLVQQLQNTaDVQVPPLTEEEQEARDALCSSVAA 120 zebrafish
XP_003460215  84 LSSVMELLQHFEQTtDMEVETLTESERESVALLSAVSCT 122 Nile tilapia
XP_003725973  92 LMSASHALQRLHQTsGTELPDISEQEALVQSILGIPVSS 130 purple urchin
XP_003780056  79 LHKAMTSMQELQRHrDXQLSPPTEEENSAAQQLTSHCQA 117 Sumatran orangutan
XP_002736818  81 LQMACQALQKIQDQaGADPQEQTEEDKMAEAMLGLNLSQ 119 Saccoglossus kowalevskii

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