2MXW


Conserved Protein Domain Family
OCRE

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cd16074: OCRE 
Click on image for an interactive view with Cn3D
OCRE domain
The OCRE (OCtamer REpeat) domain contains 5 repeats of an 8-residue motif, which were shown to form beta-strands. Based on the architectures of proteins containing OCRE domains, a role in RNA metabolism and/or signalling has been proposed.
Statistics
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PSSM-Id: 293880
Aligned: 24 rows
Threshold Bit Score: 44.9679
Created: 6-Nov-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:OCRE repeat 1 [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ########                                                    
2MXW_A        11 PVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAq-SQQYLYWDge----------rRTYVPA 64  human
ETO62486     376 FETAGGSYVYVSEYGLYWDPDSLFYYDAHTMMYHNSf-TGTYYRCVdpqss---gasafQVFEPP 436 Phytophthora parasitica P1976
EJK66753     241 FEQDSAEFIFDSRSGMFFEPQSNFFYDPKTKLYFSNk-KQLYYRFDge---------sdPPFWPV 295 Thalassiosira oceanica
CBK23140      63 YRTNSLNFTFDAASGFFYEASSKFYYCSSADLYLDSv-SSLYYTLKdh---------tlTPFTPP 117 Blastocystis hominis
CBJ27754     359 FEEAGAAYLFDGPSGYFYESTTGVYYDPRSKLYCKG--MVWYSHTPgq----------dPAFNPV 411 Ectocarpus siliculosus
XP_001784602  20 VASDAPGFVFDSTSGLYYDASSGFYYDAQAGWYYNTh-DGQYYIYEn------------EAYVPL 71  Physcomitrella patens
XP_003380697  30 ETSAQNDFEFIDILGIFYNRESGYFYKPGNPEFYHAt-TECCYSYNvqtg------eseWRYCPD 87  Trichinella spiralis
WP_011447236 214 SSSGTKDFAYDPYTGLYRDTDTGYYYIPNLGVFFDPttNKFYYPSEfgnysenffqnyeGQYIPS 278 Methanospirillum hungatei
KHJ88282      20 HSRVPEGFQWIEAYGQYYSPSCGFFYDPNTGLFYHHd-SETYYIFNde----------tQQYEIY 73  Oesophagostomum dentatum
NP_502415     17 QSRIPPGYVLYPNYEQYWSHEHGMFYNPDTEQFYRPe-DKTVYQLNae----------gSEYVLV 70  Caenorhabditis elegans

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