3J20


Conserved Protein Domain Family
uS17_arch

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TIGR03630: uS17_arch 
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ribosomal protein uS17, archaeal form
This model describes exclusively the archaeal ribosomal protein S17P. It excludes the homologous ribosomal protein S17 from bacteria, and is not intended for use on eukaryotic sequences, where some instances of ribosomal proteins S11 score above the trusted cutoff. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 274687
Aligned: 22 rows
Threshold Bit Score: 143.982
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J20_R   5 IGLRVQPPAEKCDDPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLNKYERYELRRSKIHAHNPPCI-NAKVG 83  Pyrococcus furiosus D...
Q8TW21  11 IGLGVKPPRRECDDPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYRYDRKYERWERRRSRIPAHNPPCI-DAQEG 89  Methanopyrus kandleri...
O24786   3 IGLNVTEPEGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPKYDRYMKRRSRVPAHAPECF-DISVG 81  Halobacterium sp. NRC-1
P54036   6 IGIQVKAPEVECDDKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIKKYERYERRTTKLAAHNPPCI-HARVG 84  Methanocaldococcus ja...
Q8PV41   5 IGLNIPAPSEECDDAYCPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVSKYQRYEKRRSKIHAHNPACI-SAKVG 83  Methanosarcina mazei Go1
O26120   2 VGIDVPEPKSKCSDPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDCI-DVRVG 80  Methanothermobacter t...
O28363   4 IGIDVKPPERECEDENCPFHGTLSVRGQLLRGKVVKVY-GKTAVIERELIRYVPKFERYMKKRSKLHAHNPRCI-RARPG 81  Archaeoglobus fulgidu...
Q2FT32   5 IGLNVPVPEKDCSDVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHFVRKYQRYEKRSSKIHAHNPPCL-HARVG 83  Methanospirillum hung...
Q6L1B8   4 IGIDVKKPERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIKKYERYETKISKFHAHLPGCI-DVRPG 82  Picrophilus torridus ...
Q74NJ4   3 LAELIELPKEQCNDKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPECLkDIKEG 82  Nanoarchaeum equitans...
3J20_R  84 DKVLIAETRPLSKTKHFVVVAVL 106 Pyrococcus furiosus DSM 3638
Q8TW21  90 DKVRIAECRPLSKTKSFVVIEVL 112 Methanopyrus kandleri AV19
O24786  82 DTVSIAETRPLSKTKSHVVVEIT 104 Halobacterium sp. NRC-1
P54036  85 DIVRVMECRPISKTKAFVVVEKL 107 Methanocaldococcus jannaschii DSM 2661
Q8PV41  84 DIVTIVECRPISKTKSFVVVKAE 106 Methanosarcina mazei Go1
O26120  81 DTVKIAECRPLSKTKNFVVVEVK 103 Methanothermobacter thermautotrophicus str. Delta H
O28363  82 DIVTIGECRPISKTKSFVILEVV 104 Archaeoglobus fulgidus DSM 4304
Q2FT32  84 DMVSIAECRPLSKTKTYVVVEVN 106 Methanospirillum hungatei JF-1
Q6L1B8  83 DRVKIAECRKLAKTISFVVVEKV 105 Picrophilus torridus DSM 9790
Q74NJ4  83 DYVLIGETRPLSKTKHFVVLGKL 105 Nanoarchaeum equitans Kin4-M
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