3H2Y


Conserved Protein Domain Family
YqeH

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cd01855: YqeH 
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Circularly permuted YqeH GTPase
YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Statistics
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PSSM-Id: 206748
Aligned: 31 rows
Threshold Bit Score: 142.018
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:based on structure of B. Subtilis Ylqf Gtpase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
3H2Y_A     37 CQRCFRLKHYNeiqdv--------------------------------sltddDFLRILNGIGks--------------- 69  Bacillus anthracis...
CAA90496   89 CQRCHDLKFHSrirpkel-----------------------------lqepqtTLPDIISTVNndk-------------- 125 fission yeast
NP_014848  94 CKRCSNALHHNnynpe--------------------------------efpesTLNDILNYVPr---------------- 125 baker's yeast
NP_228657  38 CQRCFRMKHYGklepv---------------------------------efdwDFKNQLKSYLgg--------------- 69  Thermotoga maritim...
NP_603969  35 CQRCFQLKHYGkysvn--------------------------------kmtreDYKKEVGKLLdd--------------- 67  Fusobacterium nucl...
XP_448897  83 CKRCSEALHNNkynat--------------------------------efkdiPFEEVEKQIPl---------------- 114 Candida glabrata C...
XP_455131 142 CKRCVDAISHNrynss--------------------------------dfpihSFNDIKGALPh---------------- 173 Kluyveromyces lact...
CAI73973  149 CQRCYKLQYYKrldtknevdssretlvkefld-genlkrnalkrvissnltakQFPVLMTQLEsetniannsvkisstse 227 Theileria annulata
EAN32886  214 CQRCSALSSNIstllsqspntltlnsvnsvnsvnsvnkgnkgnkgnnvlgireASNETIGVVRnmlrl------------ 281 Theileria parva
EAR92928  217 CYRCHQLKYQKnlidqqseisrqnqq-------------eqnqqsnlsddeneDHQQELEMTDfekgdllatkdps---e 280 Tetrahymena thermo...
Feature 1                                                                         ## ##       
3H2Y_A     70 -----------dALVVKIVDIFDFngs-wlpGLHRFVGnn----------------------kVLLVGNKADLIPksvk- 114 Bacillus anthracis...
CAA90496  126 ----------stCLIIQVIDVTEVifq-dfvSATQYTHf-----------------------pVFHLFTHADVLPp---- 167 fission yeast
NP_014848 126 -----------gSNVMHIVPFVEFplh-ldpNVLKRNDl-----------------------dTTLVLTKSDQVFkdkna 170 baker's yeast
NP_228657  70 -----------fDVVVWVIDIFDFegt-yreDIAEILKgk----------------------rVIYVINKIDLLPravt- 114 Thermotoga maritim...
NP_603969  68 -----------vKLVIAVFDIIDFegs-fdvEILDILRek----------------------dSIVIVNKLDLIPdekh- 112 Fusobacterium nucl...
XP_448897 115 -----------hSNVVHTAPILEFpfh-insQLLKNRTf-----------------------nTTMVFTKADRVFk---- 155 Candida glabrata C...
XP_455131 174 -----------aANVYHVVSLSDFplsldktILAEKNNr------------------------NYLLLSKADQITykssm 218 Kluyveromyces lact...
CAI73973  228 iisnmatriknnSLILFVLDLTNLei----sVIPELYIalrn-----------------rtleVIWIANKIDVLPkvvd- 285 Theileria annulata
EAN32886  282 -------ksrrrVTILYIIDVIDPhi---eyKLLQIIKqrrfsvtglatthtdlsresiggvrFYLILNKIDLLPkhnke 351 Theileria parva
EAR92928  281 flkkafklvkrnSTIIFVVDATDLfat-lntSIVDYAFaqn--------------------hkIILAVNKIDALPpnnv- 338 Tetrahymena thermo...
Feature 1                                            ###                                    ##
3H2Y_A    115 -----hdkVKHWXRYSAKqlg---------lkpEDVFLISAAKGQGIAELADAIEYyrg----------gkDVYVVGCTN 170 Bacillus anthracis...
CAA90496  168 -------kKPYWLFPGLGis------------sKYAMLYTSHSFNLVDKLLGRINPllc---------srgHVYVVGEAN 219 fission yeast
NP_014848 171 vskkvpifMKQFLKNTLRid------------sNKTFAISALKNWNISMFYNYFKN---------------YTYLLGNPN 223 baker's yeast
NP_228657 115 -----vkeIKEWVKKRIKtk-----------ntDDIRIVSAEKNFGLTSLVKYLSRlt------------dKALVVGVTN 166 Thermotoga maritim...
NP_603969 113 -----pseVANWVKNRLAees---------ivpLDIAIVSTKNGYGVNGVFRKIKHfyp---------dgvNAMVIGVTN 169 Fusobacterium nucl...
XP_448897 156 --------NKKQVQKQIPifldaffetylnskaTRNIVTSTLNRWNLDTLFSFLHG---------------TNYFVGEPN 212 Candida glabrata C...
XP_455131 219 lphkgsafFAEFCRRHIGvh------------vKKVVLFSNPRNWNIPSVINALAK---------------RCYLLGNPN 271 Kluyveromyces lact...
CAI73973  286 -----hseIKRWLKSVVRhign--------sksSDVILISSSKGTGFDKLEHRFKEylrv-------gdprNIYVVGATN 345 Theileria annulata
EAN32886  352 ---elvqfFKKMINSKVEll-----------kaKHIFTISGKYRKNVGELMGVILTeakr--------lgnQILFIGPTN 409 Theileria parva
EAR92928  339 ----qfnqLKSVVKKCILekypn-----nlhllEDIVLVSAKSGEGLEKITKYIISakmeskqyqhsryskNFYVMGFAN 409 Tetrahymena thermo...
Feature 1     #####                                                                           
3H2Y_A    171 VGKSTFINRXIKefsdet-------------------------------------envittSHFPGTTLDLIDIPLDe-- 211 Bacillus anthracis...
CAA90496  220 SGKSTLLKTLAKrgngvf-------------------------------------nellldSFLPGTTQAIKGYPTQyfg 262 fission yeast
NP_014848 224 VGKSTLINTLLQkylgykvkidstgkinspsee--------vmqeaftnpknffkiqaagvSHIPNLTRSVQAYQVG--- 292 baker's yeast
NP_228657 167 VGKSSLLNKICThen--------------------------------------------tiSPFPGTTLGILKRKVKe-- 200 Thermotoga maritim...
NP_603969 170 VGKSSVINRLLGkki-------------------------------------------atvSKYPGTTIKNTLNMIPf-- 204 Fusobacterium nucl...
XP_448897 213 SGKSTLINALLRrlfgvkirgndvknfeldkq---------aeeelavskkfflekqlagvSHIPNLTRTLQAYKIK--- 280 Candida glabrata C...
XP_455131 272 VGKTSLINSLLHekstsfqaqldkrgnvigpp---------kgheqiqstrrraifneggvSHIPNFTRTMQTYLIE--- 339 Kluyveromyces lact...
CAI73973  346 VGKSTFVNRFLDfikykhvgtln----------------------------lrrsvggttrSAIPGTTLEFIEFGLPs-- 395 Theileria annulata
EAN32886  410 SGKSTLINLLHKqfthnslhkqfthnttn----------------gvtnksdncvckrvtsSIIPGTTLGVINISLGg-- 471 Theileria parva
EAR92928  410 TGKSSFINALNRqtkkllkkqedqqtnsnpenlnsqdklmikrllggtsvggeeddqelttSSIPGTTVSFVKSRNKr-- 487 Tetrahymena thermo...
Feature 1                    # 
3H2Y_A    212 -------ESSLYDTPGI 221 Bacillus anthracis str. Sterne
CAA90496  263 scfkqlsEGLIFDTPGY 279 fission yeast
NP_014848 293 -------GKILFDLPGY 302 baker's yeast
NP_228657 201 ------aNLYLYDTPGI 211 Thermotoga maritima MSB8
NP_603969 205 ------tNIGLYDTPGL 215 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
XP_448897 281 -------QKIIYDLPGY 290 Candida glabrata CBS 138
XP_455131 340 -------DKVVNDLPGY 349 Kluyveromyces lactis NRRL Y-1140
CAI73973  396 -------GFKLIDTPGI 405 Theileria annulata
EAN32886  472 -------GLSIYDTPGI 481 Theileria parva
EAR92928  488 ------lNVNIYDTPGI 498 Tetrahymena thermophila SB210

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