Conserved Protein Domain Family
PRK11664

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PRK11664: PRK11664 
ATP-dependent RNA helicase HrpB; Provisional
Statistics
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PSSM-Id: 236950
Aligned: 108 rows
Threshold Bit Score: 1303.75
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
50122236    1 MILPPVSAVLDDVITALHTAPQVLLNAPTGAGKSTWLPLQLLQQGNVNGRIIMLEPRRLAAKSVAWRLAQQLGEEPGQTI 80 
147673788   1 MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLAARNIARYLAQQLGEEVGQRV 80 
218710487  12 LPQLPIEAVMPDLLAGVQTHTQLILKAAPGAGKSTFFPLQLVKTNAVQGKIIMLEPRRLAARNIATYLARQLGEKVGESI 91 
156975709  12 LSQLPIEAVMPQLLTAVKNQHQVILKAAPGAGKSTYFPLQLLKSQTVTGKIVMLEPRRLAARNIARYLAQQLGEQVGERV 91 
28899272    1 MSQLPIEAVMPQLLTAVKHQHQVILKAAPGAGKSTYFPLQLIQNQVVIGKVIMLEPRRLAARNIARYLAEQLGEQVGQRV 80 
37680941    1 MSQLPIHAVMPQLLQAVSQHSQVILKAAPGAGKSTYFPLQLLLSNEFTGKIVMLEPRRLAARNIARYLAQQLGEKVGQRV 80 
27365012   12 LSQLPIHAVMPQLLQAVSQHSQVILKAAPGAGKSTYFPLQLLLSNEFSGKIVMLEPRRLAARNIARYLAQQLGEKVGERV 91 
15640622    1 MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLAARNIARYLAQQLGEEVGQRV 80 
229608886   1 --------MMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLAARNIARYLAQQLGEEVGQRV 72 
209696017   1 MSQLPIERVIPSLIDKLRTHSQVILKASTGAGKSTHLPLMLLKENVITGKIIMLEPRRLAARNIASYLASLLGEKVGEQI 80 
50122236   81 GYRMRSESRVSAATKLEVVTEGMLTRLLQQDAELQGVGLIILDEFHERSVQADLALALLLDVQQGLRDDLTLLIMSATLD 160
147673788  81 GYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLD 160
218710487  92 GFRVRGESKTSSATRLEIVTEGIMTRMIQTDPELTGVDMVIFDEFHERSIHADTALAFSLEIQDALRDDLKVVVMSATLD 171
156975709  92 GYRVRGETKVSNHTQLEIVTEGIMTRMIQKDPELDGIELLIFDEFHERSIHADTALAFSLEVQEALRDDLKLVVMSATLD 171
28899272   81 GYRVRGETKVSASTQLEIVTEGVMTRMIQNDPELDGVDLLIFDEFHERSIHADTALALSLEVQEALRDDLKLVVMSATLD 160
37680941   81 GYRVRGESKVSHVTQLEIVTEGIMTRMIQSDPELNGIDVLIFDEFHERSLHADIALALALEVQEALRDDLKLVVMSATLE 160
27365012   92 GYRVRGESKVSHMTQLEIVTEGIMTRMIQSDPELNGVDVLIFDEFHERSLHADIALALALEVQEALRDDLKLVVMSATLE 171
15640622   81 GYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLD 160
229608886  73 GYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLD 152
209696017  81 GFRVRGETKVSNKTRLEIVTEGIMTRMIQSDPELSGVGLLIFDEYHERSLHADTALAFALEVQEALREDLKLLVMSATLE 160
50122236  161 NARLSALLPEAICVVSEGRSYPVERCYAPLNSQDRFEEGVARQVRRLLSEESGSLLLFLPGVAEIRRVQALLENSVSSET 240
147673788 161 QQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVAAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD-LASEV 239
218710487 172 QHALQSLLPDAKYVESQGRTFPVDFRYQPLGSNEYLAPKMANVIRSLMEKESGSLLAFLPGVSAIKQVESQL-GQLVSDI 250
156975709 172 QDALQSLLPEADYIESEGRSFEVETRYLPLGANDHLPTSVAKTIENLMVKESGSLLAFLPGVAAIKRVEERLSH-LPDNV 250
28899272  161 QEALQSLLPEACYIESEGRSFAVETRYAPLTANDHLSTVMAKNIESLMNKESGSLLAFLPGVAAIKQVQERLSH-LPDDV 239
37680941  161 QHALQSLMPQASFIESQGRSYLVEQRYQPLKTNDFLPNVMAKTIEHLLATETGSLLAFLPGVAAIKQVAERLDH-LSEQV 239
27365012  172 QHALQSLMPHASFIESQGRSYLVEQRYQPLKTNDFLPNVMAKTIEHLLATESGSLLAFLPGVAAIKQVAERLEH-LSEQV 250
15640622  161 QQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD-LASEV 239
229608886 153 QQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD-LASEV 231
209696017 161 HDALKQLLPQACYLESDGRMFPVTTQYQPLKVNQRIVEATESSIRKMLDEEKGSILVFLSGASEIRQLEDRLRN-VSSDV 239
50122236  241 DLCPLYGALTLAEQQKAILPADPGRRKVVLATNIAETSLTIEGIRLVVDSGLERVASFDVKSGVTRLVTQRISQASMVQR 320
147673788 240 EICPLYGQMEFAAQQRAIAPTAAGMRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
218710487 251 DVCPLYGQLSFEQQQRSIAPSVKGRRKVVLATNIAETSLTIEGIRLVVDSGLERVAKFDLKTGITKLEQVKISQSSAEQR 330
156975709 251 EVCPLYGQLSFAEQQKAISPASSGKRKVVLATNIAETSLTIEGIRLVVDSGLERVARFDLKNGLTRLEQVRVAQSSAIQR 330
28899272  240 EVCPLYGQLSFTEQQKAISPAEKGKRKVVLATNIAETSLTIEGIRLVVDSGLERVARFDLKNGLTRLEQTRIAQSSAIQR 319
37680941  240 VICPLYGQLSFSEQQKAIEPAKTGERKVVLATNIAETSLTIEGIRLVVDSGLERVAKFDLKTGITKLEQVRIAQSSAIQR 319
27365012  251 VICPLYGQLSFAEQQKAIEPAKAGERKVVLATNIAETSLTIEGIRLVVDSGLERVAKFDLKTEITKLEQVRIAQSSAIQR 330
15640622  240 EICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 319
229608886 232 EICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQR 311
209696017 240 IVAPLYGQLEPKKQLQALQPAANGKRKVVLATNIAETSLTIEGIRIVIDSGYERTATFDAKTGITKLEQKRIAQSSAEQR 319
50122236  321 AGRAGRLSPGICWHLCSREQAERAAAQSEAEILNSDLSSVWLDLLQWGCTDVAQLTWLDTPPVPALYAARQLLCQLGIAD 400
147673788 320 AGRAGRLEPGICVRLYSEAQLKQQPWVSEPEMLHTDLAPLALELAQWGA-QPSDLAWLNLPPSSAFAQAQQLLQRLGLLD 398
218710487 331 AGRAGRIEEGLCVRLYSETQLMQQPAVPEPEILHSDLSSLVSELTQWGAASAEELQWLDVPPKASTEQGKQLLQNLELLD 410
156975709 331 AGRAGRTEEGICVRLYSESQFKQQPQVPQPEILHSDLASLVMELAFWGAGDISELKWLNIPSSASLAQAKQLLISLGLLT 410
28899272  320 AGRAGRIEEGICVRLYSESQLKQQPQVPQPEILHSDLASLVMELAFWGTTDIHELKWLDIPSAAALRQAKQLLFSLGLIT 399
37680941  320 AGRAGRVEEGICVRLYSESQYQQMASVPLPEIMQADLAPLMMELAQWGVSEPEQVKLLDIPSSASVRQAKQLLQQLGLIS 399
27365012  331 AGRAGRVEEGICVRLYSESQYQQMASVPLPEIMQADLAPLMMELAQWGVSEPEQVKLLDIPSSAAVRQAKQLLRQLGLIS 410
15640622  320 AGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGA-QPSDLAWLNLPPSSAFAQAQQLLQRLGLLD 398
229608886 312 AGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGA-QPSDLAWLNLPPSSAFAQAQQLLQRLGLLD 390
209696017 320 KGRAGRLEEGICLRLYSESQYQQLAVSQTPEIESSDLSSLIVELTKWGVTDPLDLMWLTPPPDSNMNQGKELLCLLGLID 399
50122236  401 DQgRLTAEGRKIAALGCDARLATMLYAASQQSVEAlaTAGCLAAILEEPPRSG-SINLADWLH--------------RPL 465
147673788 399 ARtQLTAAGKEAHLLGVEPRIAAMLLSADRLGESAlqSALALAVLLEEPERQV--IDVQHSLHrwqq-------grhPKQ 469
218710487 411 ANgQFTSMGKQAQRLGIEPRIASMLIKAQQNSPALlnVAIVAAALLEEPERNV--TDIQHSLHrlkq-------rkhSKN 481
156975709 411 EQgQLTSAGKTAHALGVEPRSAAMLIQTQQHSEKMlnTALAAVALIEEPERNV--TNVAHSLHrwvsgthtkkailhKRS 488
28899272  400 EQgQLTAEGKQAHDLGVEPRAAAMLIKSQSHSDKMvnVALAAVALIEEPERNV--TNIAHSLHrwls-------gshPKK 470
37680941  400 GH-QLTSEGQLAQRLGVEPRIAAMLIGAQQRDETLfaSALAVAVMLEEPERNI--SNVCHSLH--------------RWQ 462
27365012  411 GH-QLTSEGQLAQRLGVEPRIAAMLIGAQQRDETLfaSALAVAVMLEEPERNI--SNVCHSLH--------------RWQ 473
15640622  399 ARtQITAAGKEAHLLGVEPRIAAMLLSADRLGESAlqSALALTVLLEEPERQV--IDVQHSLHrwqq-------grhPKQ 469
229608886 391 ARtQITAAGKEAHLLGVEPRIAAMLLSADRLGESAlqSALALTVLLEEPERQV--IDVQHSLHrwqq-------grhPKQ 461
209696017 400 QQgKLTLKGEQAQRLGIEPRLATVLLQAKALSNEHlqTALHILPIIEESAKSIkSNDLSLHLSvfid-------gkyPKQ 472
50122236  466 PHWLRRAKQLTRRLSTASGHIadf---ghiDSGEADWLLAQAFPDRIARRRSQD-GRYQLANGSGVMMSADEALSGNEWL 541
147673788 470 KLLIQRAQSLAHKLDTAFSLSs-------vDSTWLPLVACLAFPDRIAQQRGQQtGQFLLANGHGAWLAVEERLSAADYL 542
218710487 482 SVVMQRAKSLASKLNHHLDLSq-------vDESLLPLVLCFAFPDRIAQSRSATgCAFRLANGHGAEVRDDDRLANNEYI 554
156975709 489 QTLAHKRDTAFSLAk--------------vDERVLALVLSLAFPDRIAQQRVNQyGRFTLSNGHGAECRPEETLGGCDYL 554
28899272  471 TLLLKRAQSLAHKLDTTFSLRe-------vDEDALPLVLSLAFPDRIAQQRANQfGRFALANGHGAECRPDDMLGGCEYL 543
37680941  463 QSKHGKTTLLTQRANALANKLngtfslkrvTESACAIAASLAFPDRIAQKRGQQfGRYLMANGHGAELREDDPLGGEEYL 542
27365012  474 QSKHGKTTLLTQRANALANKLngtfslkrvTESACAIAASLAFPDRIAQKRGQQfGRYLMANGHGAELREDDPLGGEEYL 553
15640622  470 KLLIQRAQSLAHKLDTAFSLSs-------vDSAWLPLVACLAFPDRIAQQRGQQtGQFLLANGHGAWLAVEDRLSAADYL 542
229608886 462 KLLIQRAQSLAHKLDTAFSLSs-------vDSAWLPLVACLAFPDRIAQQRGQQtGQFLLANGHGAWLAVEDRLSAADYL 534
209696017 473 HYYQQRVSCLAKLMEVDVDLHn-------vSLALIGETLACGFPDRIAIEKGAV-GHFQLSNGHGVQIDEIESIAQSEHL 544
50122236  542 LAPALLQNDrlmqnkqSADARILLALPLDIERLERRLPGLINERNVVHWDEEKGTLRASQRDQIGCLILRMRPLNKPSDE 621
147673788 543 VALDLMRGQ-------TQASQIFSALELDIHALERLLPALISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQ 615
218710487 555 VVIDLMRTA-------GRASQIFLATPIDIVQLEASFSGLFTREDYADWDEKRGRLVAEERVLLGKLIISTKALPEPDSD 627
156975709 555 VAIDLMRSH-------SNSSQINLACDLDINALQETFEQLFTTTELVDWDEKKGRLIAERQIKLGQLVIKREALPSPGKE 627
28899272  544 VAIDLMRSH-------SNSSQIHLACELDVNILQTTFDSLFSTEEVVDWDEKKGRLVAEKQRKLGQLVIERVSLPNPGKE 616
37680941  543 VVLDLMRGQ-------KNASQIQLAIPLDLSALQQSNPSCLVNHEHIDWDETKGRLLAEKQRRIGELVVSRETLAQPGKE 615
27365012  554 VVLDLMRGQ-------KNASQIQLAIPLDLSALQQSNPSCLVNHEHIDWDETKGRLLAEKQRRIGELVVSRETLAQPGKE 626
15640622  543 VALDLMRGQ-------TQASQIFSALELDIHALERVLPALISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQ 615
229608886 535 VALDLMRGQ-------TQASQIFSALELDIHALERVLPALISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQ 607
209696017 545 VVVDLLKGM-------QNRSQVFLAASLSRTSLNTVCASCIFDVEHVDWDEKSGRMIAEKRTYLNKILLSKERISSPDKN 617
50122236  622 VLQQAMLSWIREQGLKALNWDAAALQLRARLQCAHQWLPEVDWPRVDDDTLLATLDIWLQPSLSGVRDLRALHQINLSDA 701
147673788 616 KMTQALLSYVRRKGLTVLQWSEDASEWLARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQA 695
218710487 628 QISQALLNYIARCGLERLHWTSSAKQLVERVRCAQLWMPEHDWPAMDDASLIEHLDEWLSPYLNGIKSAKGLSNVSIEQA 707
156975709 628 KMTQALLTYVRRQGLQSLNWTPAAENLLERIRCAVEWLPEQDWPSFDEAHLLNNLEEWLEPYMSTVSSVKDLAKVNLVEA 707
28899272  617 KMTQALLTYVRRQGLSSLNWTPAAESLLERIRCAVDWLPEQAWPMFDEASLLDSLDEWLEPYMTSVASVKDLSKINLVEA 696
37680941  616 KMTQALLSYVRRKGLAVLDWSEKSQSLLERIRCAIEWLPEHAWPAMDDASLLSELEQWLEPYMAHVTTVKDLAKINLCEA 695
27365012  627 KMTQALLSYVRRKGLAVLDWSEKSQSLLERIRCAIEWLPEQAWPAMDDASLLSELEQWLEPYMAHVTTVKDLAKINLCEA 706
15640622  616 KMTQALLSYVRRKGLTVLQWSEDASEWLARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQA 695
229608886 608 KMTQALLSYVRRKGLTVLQWSEDASEWLARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQA 687
209696017 618 KIAHALLSMVKRKGLDCLGWSSTTYSLLLRLRCMALWMPEYPLPPMNDDDLLSRLDEWLLPFMNGVNNDKHLKSINLKDA 697
50122236  702 LLRLLDWSLRQRLDSALPTHYTAPGGSRLPIAYYDDKPPVLSVRMQEMFGEQKSPLLAEGRVALVLELLSPAQRPLQITR 781
147673788 696 LKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMELLSPAQRPLQVTR 775
218710487 708 LSAYLGWPLNQEIDQWLPTNYLMPTGSKKSIRYQYKSEPMISVRMQEVFGEQDSPLIAQGRKKVVLELLSPAQRPLQITQ 787
156975709 708 LNARLGWPLNQNIDEWLPEDYRLPTGSKKRIRYQFGHEPVLSVRMQEVFGESASPTVAQGRKRLVLELLSPAQRPLQVTT 787
28899272  697 LNARLGWPLNQHLDEWLPEHYQLPTGTKKRIRYQHGHEPVLSVRMQEVFGESTSPTVALGRKRLVLELLSPAQRPLQVTS 776
37680941  696 LNARLGWPLNQQLDEWLPKYYTLPTGTQQMIRYQQGANPVLSARMQEMFGEQSSPTVAQGRVKLTLELLSPARRPLQVTQ 775
27365012  707 LNARLGWPLNQQLDEWLPKYYTLPTGTQQMIRYQQGANPVLSARMQEMFGEQSSPTVAQGRVKLTLELLSPARRPLQVTQ 786
15640622  696 LKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMELLSPAQRPLQVTR 775
229608886 688 LKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMELLSPAQRPLQVTR 767
209696017 698 LEAYVGWENIKLLNEYLPTHYVLPTGTKAAIVYDPQYEPKISVRMQEVYGEADSPLLAQGKKRLVMELLSPAQRPLQTTS 777
50122236  782 DLAAFWQGTYREVQKEMKGRYPKHIWPDDPANTAPTRRTKKYQ 824
147673788 776 DLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKRQL 818
218710487 788 DLAGFWAGAYKEVQKEMKGRYPKHPWPDDPANHVATTKTKRQL 830
156975709 788 DLAAFWAGSYKEVQKEMKGRYPKHVWPDDPATHVATTKTKRQL 830
28899272  777 DLAAFWNGSYKDVQKEMKGRYPKHVWPDDPANHVATTKTKRQL 819
37680941  776 DLAGFWAGAYKEVQKEMKGRYPKHVWPDDPATHQATNKTKRQL 818
27365012  787 DLAGFWAGAYKEVQKEMKGRYPKHVWPDDPATHQATNKTKRQL 829
15640622  776 DLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKRQL 818
229608886 768 DLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKRQL 810
209696017 778 DLAGFWAGSYREVQKEMKGRYPRHIWPDDPASHAATKKTKRHF 820
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