1E4G,2YCH,3H1Q


Conserved Protein Domain Family
ASKHA_NBD_PilM-like

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cd24004: ASKHA_NBD_PilM-like 
nucleotide-binding domain (NBD) of the PilM-like domain family
The PilM-like family includes type IV pilus inner membrane component PilM, cell division protein FtsA, and ethanolamine utilization protein EutJ. PilM is an inner membrane component of the type IV (T4S) secretion system that plays a role in surface and host cell adhesion, colonization, biofilm maturation, virulence, and twitching, a form of surface-associated motility. FtsA is an essential cell division protein that assists in the assembly of the Z ring. It may serve as the principal membrane anchor for the Z ring. It is also required for the recruitment to the septal ring of the downstream cell division proteins FtsK, FtsQ, FtsL, FtsI and FtsN. EutJ may protect ethanolamine ammonia-lyase (EAL, eutB-eutC) from inhibition. It may also function in assembling the bacterial microcompartment and/or in refolding EAL, suggesting it may have chaperone activity. Members in PilM-like family belong to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily of phosphotransferases, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.
Statistics
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PSSM-Id: 466854
Aligned: 28 rows
Threshold Bit Score: 175.944
Created: 5-Oct-2022
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
nucleotide
Conserved site includes 19 residues -Click on image for an interactive view with Cn3D
Feature 1:nucleotide binding site [chemical binding site]
Evidence:
  • Structure:1E4G; Thermotoga maritima FtsA in complex with MgATP, contacts at 4A
  • Structure:3H1Q; Carboxydothermus hydrogenoformans ethanolamine utilization protein EutJ binds ATP, contacts at 4A
  • Structure:2YCH; Thermus thermophilus PilM in complex with MgATP, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             ## # #                                                                     
1E4G_T        11 TSIDIGSrYIKGLVLGkr---dqEWEALAFSSVksrgldeg------eikdaiaFKESVNTLLKEleeqlqkslrSDFVI 81  Thermotoga mari...
2YCH_A        16 LGLEIGAsALKLVEVSg-----nPPALKALASRptppgllxe----gxvaepaaLAQEIKELLLEart-----rkRYVVT 81  Thermus thermop...
WP_038671233   7 LGIDIGTsTIKVFIGTld----tNGNVLVAGSGtaptvgfkk----gifsdpklLAMTIKQAVDCavgat-dicvKDAYI 77  Pelosinus sp. UFO1
CDE15729       9 SAIEISNgGVKLLVGYyy---egKVYVLHALQSteaslsng------fiddidsISMSIKEVVNSaesql-gqkiTDVSL 78  Clostridium sp....
TAH33279      22 VALDIGTeFVKALIARid---gdNIEIVGVGRArqdlsdmhs----gaisdisgVVKNCEEALAQaeeqa-gvqgKRAVI 93  Candidatus Sacc...
TMC91287      46 TALDIGTaFAKAIIVEvh---ddQATVLGVGRHqqsyahmsd----givtdisgVIANCNEALIKaekaaggivaPSAVI 118 Chloroflexi bac...
OCL26832      19 IALDIGTeYVKAMIVKfn---qnNSEIIGYSREkqdyinmeg----gaisnieeVIKICHKAIEQaiama-dyspSEIVI 90  Orenia metallir...
CDC41326       8 FGLELTSsSIKMVAGYll---neSICVLDAIEEkcnglsdg------liinqdeVVKSIKSVVNQmsrsl-nmliDEVCL 77  Firmicutes bact...
PLX17112      11 IIIDIGTyFTKAVVVEek---leNGAKINFSIEpsgfqldfsplqeskvedeenFIETLRLAYSRlkt-----meKNVFI 82  Candidatus Muir...
EKD68565       6 VCIDLGSkFIKAAVLKskkdgdkHITLAKFGMVetpekamvnvfsdkpiskpkeVQAKLKELVTKtgi-----kgYDAIL 80  uncultured bact...
Feature 1          #                                                                             
1E4G_T        82 SFSsvsferedtvierdfgeekrsitldilsexqsealeklkeng-------------ktplhifskrylldderivfnp 148 Thermotoga mari...
2YCH_A        82 ALSnlavilrpiqvpkxplkexeeavrweaeryipf------------------------------pidevvldfapltp 131 Thermus thermop...
WP_038671233  78 GISgieikavnslgsvsplltdqitqddisrgkraatfvavted---------------hevlhvlpqkffvdkqrvelp 142 Pelosinus sp. UFO1
CDE15729      79 CLPpieldvisksdntttmsadsiisqgdivnvttkikkvvmseiq----------nkrivsilpfkyalddgqtyrilp 148 Clostridium sp....
TAH33279      94 GIAgelvkgitntirykrpqpdkaldinemefiiekvqeraqvkaqkqiayetgnedvevklvnsaivsihidgykvsnp 173 Candidatus Sacc...
TMC91287     119 GIAgelvkgssitinkqrqqpakpitpeeleglingaqqkllksakdriaaetgyqnievrltnaavisvridgqtvanp 198 Chloroflexi bac...
OCL26832      91 GIAgefvkgiitqmnytrsipkkkikrkeidalvkkaqklalksvqqellediglenikvelvnssvvemkidgykvtnp 170 Orenia metallir...
CDC41326      78 AIPpfnllcmcdtgstntvdgnnvirhidttniltamkkrsladsd-----------lkiidivpdtyminnneryynep 146 Firmicutes bact...
PLX17112      83 NIPdhfvvirlitlkpeehkgisskenlenavlkklk-----------------------------pslpvnidrwffdm 133 Candidatus Muir...
EKD68565      81 LIPdylavanwlnmpvkakdaidkaipstlspll-----------------------------------pleldkwfydy 125 uncultured bact...
Feature 1                                                 #                         #### #       
1E4G_T       149 ldxkaskiaieytsivvplKVYEXFYNFLQDTvkSPFQLKsSLVSTAEGVlttpe----kdrgVVVVNLGYnFTGLIAYK 224 Thermotoga mari...
2YCH_A       132 lsevqegeqvqvxvaaarqEAVAGVLEALRGAglVPVVLDvKPFAGLYPLearlae--epdrvFLVLDIGAeSTSLVLLR 209 Thermus thermop...
WP_038671233 143 lqengshlevqahivsipkKILNSLVNAIEELgiNVVNVVvNSIVVTENIksts------sgnFLLMDIGAgTTELTLYQ 216 Pelosinus sp. UFO1
CDE15729     149 kdavsntltisvdchiiddDIYQSYKEAVEKAglRIINFLiAPYATVKLIelyqe----ipakYVLIDIGAkSTTISSIK 224 Clostridium sp....
TAH33279     174 igfqgkdvaiqiytafapmVHIGALERTAGELdlDLIAVAaEPFAVSRSVlgtda---sssftAILVDVGGgTTDIAVVN 250 Candidatus Sacc...
TMC91287     199 vgfrgrhftltlfsafaplMQLGALETVAQGLdlTLVTIVaEPYALARCLstnag----tdsgAIFIDIGGgTTDIALVR 274 Chloroflexi bac...
OCL26832     171 eqfqgknlevtvfntfaplVHVGALETIALRLgyNLVGIIaEPFAIAKSImnnea----yefgAIVIDIGGgTTDIALIR 246 Orenia metallir...
CDC41326     147 igkmsevlslhasiyamsvKVIAQFENCVNNAglKIKKTViAPYADALYLstvka----ipnsYFLIDIGNsVTTISQIN 222 Firmicutes bact...
PLX17112     134 qmvdeidgnkiflveamlrSNLFEIERLVRKIglNPVGVDiNSFNCSNLFadyfekkgnheknISLVCINNkSTTIMIFR 213 Candidatus Muir...
EKD68565     126 qivenskkqttvvaqailkNNLFDLGDLIANAglNIAGIDtTFFNLMNLLhpyytdaevekknIAVVYMGHeATSVAFLK 205 uncultured bact...
Feature 1                      #   #                                                             
1E4G_T       225 NGVPIKISyv-pvGXKHVIKDVSAVLdtsFEESERLIITHGnavyndlkeeeiqyrgldgntiktttakklsviihARLR 303 Thermotoga mari...
2YCH_A       210 GDKPLAVRvl-tlSGKDFTEAIARSFnldLLAAEEVKRTYGxatlptedeellldfd---aereryspgriydairPVLV 285 Thermus thermop...
WP_038671233 217 EGYVFLSAsl-plGGDYITSDIMQGIsisWNHAEEIKKYYAkldkqlrgqeitldcn----aynttdkhipydflnDIVE 291 Pelosinus sp. UFO1
CDE15729     225 ENRVLNGRav-sfGGTDIIKVVAKEFnisYEKAFHYIEVYGlsknpsfsfkted----------gftieqlsstikRALN 293 Clostridium sp....
TAH33279     251 DGGVEGTRmf-giGGRSFTRTIANDMdlsYVDAEKLKVNIDhaqlkesve------------------kqvstsidKTLD 311 Candidatus Sacc...
TMC91287     275 QGGIEETRmf-alGGRTFTRRLATNKgisVKEAEKLKLSYSsgnvkgadr------------------deiqsilaPECQ 335 Chloroflexi bac...
OCL26832     247 NGGIEGTKmf-slAGRDFTKSLARSFnltLEDAERLKVAYSssesdepn-------------------keieavlkPDLD 306 Orenia metallir...
CDC41326     223 RGYTVNFSrilkfGGNDITLAIANEFnisFEEAEELKNTYGidhnpnf---------------------nvyikdkITLD 281 Firmicutes bact...
PLX17112     214 NGNLRTAQtr-liGGEDLIKRIAEGKgisIKDAAKVMQEETvflpelaeqq---------------dlienyryikEVYS 277 Candidatus Muir...
EKD68565     206 ESVIKSSRsl-plGGAAFTKNIMEARrcdEVAAEKIKKEEEiflkdnpdkq---------------nkvelyniikPSFG 269 uncultured bact...
Feature 1                                           ###  ##                                      
1E4G_T       304 EIXSKSKKFFREveakivee---geigipgGVVLTGGGa-KIPRINELATEVFk---SPVRTGCyansdrpsii------ 370 Thermotoga mari...
2YCH_A       286 ELTQELRRSLEFfriqle-------easpeVGYLLGGGs-KLRGLASLLTDTLg---VNLEPVNpweavavdpkr----f 350 Thermus thermop...
WP_038671233 292 SRVSEIIYLLSDylklsl------eeiqigKVFLTGGCg-AMPSFIECIGTTFg---VPVEIIHpsdlpp---------- 351 Pelosinus sp. UFO1
CDE15729     294 TLVSQINVAIGEydl------------yetSVFIVSGGvaNLYGLDDFLAETFh---VNVMVFTpdnyg----------- 347 Clostridium sp....
TAH33279     312 VWLGGVELALSEfdsvd---------hlpnRILLCGGGs-SLQRLVDALEQRDwykeLPFTKRPsvqhiktadvvg---i 378 Candidatus Sacc...
TMC91287     336 TWMDSIELLIEElskge---------llppAIYTVGGGs-ALPDLRQKLESFPw---TERLPFArqpiiqtvqpemvtsi 402 Chloroflexi bac...
OCL26832     307 LLYEGIELALASlakse---------alpqRVYLCGGGs-ALSGLFDGIRQRKmyenLPFFKKPeirlldaedikg---v 373 Orenia metallir...
CDC41326     282 DLSQVIVKTISQqldifktiiddseeknslPVVLIGGTs-CLHNIKKIVADELe---LDVINFTlptlg----------- 346 Firmicutes bact...
PLX17112     278 ELIISLFNMFEYytenfk-------eseihEVIITGGLs-NMNNIAENLEARLn---IPVIRGSdlksfkdkdg------ 340 Candidatus Muir...
EKD68565     270 ELIKGIYNSIDQylarfr-------efkihEIILCGGTs-NFRNINNAMQLHLn---TKTVMLSeiftidsask------ 332 uncultured bact...
Feature 1                  #         
1E4G_T       371 -nadevandpSFAAAFGNVF 389 Thermotoga maritima
2YCH_A       351 eseqlqeigpEFAVALGLAL 370 Thermus thermophilus HB27
WP_038671233 352 -----eysspGNTACYSIVK 366 Pelosinus sp. UFO1
CDE15729     348 ------arnkSYTNLLGMIK 361 Clostridium sp. CAG:288
TAH33279     379 tdntkseldhTFVTAMGLLR 398 Candidatus Saccharibacteria bacterium
TMC91287     403 tdphgmlknaQDITPMALAY 422 Chloroflexi bacterium
OCL26832     374 edkvnllrgaENVTPKSLAL 393 Orenia metallireducens
CDC41326     347 ------arryGFVTVLGLIK 360 Firmicutes bacterium CAG:449
PLX17112     341 -neissekvnILASCVGSAF 359 Candidatus Muirbacterium halophilum
EKD68565     333 -tvlsedeknCLQCCVGGLL 351 uncultured bacterium

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