Conserved Protein Domain Family
zf_CCCH_5

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pfam18384: zf_CCCH_5 
Unkempt Zinc finger domain 1 (Znf1)
This is CCCH zinc finger 1 domain found in Unkempt N-terminal region. Unkempt is an evolutionary conserved RNA-binding protein that regulates translation of its target genes and is required for the establishment of the early bipolar neuronal morphology. It carries six CCCH zinc fingers (ZnFs) forming two compact clusters, ZnF1-3 and ZnF4-6, that recognize distinct trinucleotide RNA substrates. These clusters, recognize an unexpectedly short stretch of RNA sequence-only three consecutive ribonucleotides-with a varying degree of specificity. ZnF1-3 binds to the UUA motif of RNA substrates.
Statistics
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PSSM-Id: 375810
Aligned: 3 rows
Threshold Bit Score: 52.5462
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001640088    9 YTYLKEFRVEQCPLFLQHKCTAHRPFTCFHWHFMNQRRRR 48  
CEL97731      473 MHFMFNCHTRKCPRFGQGHCPAHKPMVCFDFHFDSQKRRR 512 
XP_009022390   18 YNYLKSFRVDQCKEFLQHQCQFHKPYTCFKWHFPNQRRRR 57  
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