Conserved Protein Domain Family
7tmC_RAIG2_GPRC5B

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cd15278: 7tmC_RAIG2_GPRC5B 
retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of seven-transmembrane G protein-coupled receptors, group 5, member B
Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG2 (GPRC5B), a mammalian Boss (Bride of sevenless) homolog, has been shown to activate obesity-associated inflammatory signaling in adipocytes, and that the GPRC5B knockout mice have been shown to be resistance to high-fat diet-induced obesity and insulin resistance.
Statistics
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PSSM-Id: 320405
Aligned: 4 rows
Threshold Bit Score: 274.77
Created: 2-Feb-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative allosteric modulator binding site [chemical binding site]
Evidence:
  • Comment:based on the binding of human mGluR1 receptor to a negative allosteric modulator FITM (contacts at 4A)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                   #           ##  ##  #
Q9NZH0        54 IWGIVVEAVAGAGALITLLLMLILLVRLPfikekEKKSPVGLHFLFLLGTLGLFGLTFAFIiqedETICSVRRFLWGVLF 133 human
EMP31525      46 IWGIVVEAVAGAGVLTTLLLMLILLVRLPfikdkEKKSPLGMHFLFLFGTLGLFGLTFAFIiqedETVCSTRRFLWGVIF 125 green seaturtle
Q4RJM3        45 IWGVAVESVAAGGVLIAILLALVLLCRLRhvseaEKRSGVGPVLLLLLGTLGLFGLSFAYLieqdESLCLLRRALWGLLF 124 spotted green p...
NP_001093384  46 IWGIVVEAVAGAGVLTTLLLMLILLVRLPfitekEKKSPLGIHFLFLLGTLGLFGLAFAFIiqedEAICCSRRFLWGVLF 125 African clawed ...
Feature 1                                                                     #    #  ##  #      
Q9NZH0       134 ALCFSCLLSQAWRVrrlvrhgtgpagwqLVGLALCLMLVQVIIAVEWLVLTVlrdtrpaCAYEPMDFVMALIYDMVLLVV 213 human
EMP31525     126 ALCFSCLLAQAWRLrklvrhgkspsgwhLAGMAICLMLVQVIIATEWLILTIvrdkklaCNYEPVDFVMALIYVMFLMMV 205 green seaturtle
Q4RJM3       125 AVCFSCLLVQGVRLrrlgrerrgpggcaLTGLALGLSAVQGIIAAEWLLLTVlregraaCQYLPLDFSLACTYVLVLLLA 204 spotted green p...
NP_001093384 126 SLCFSCLLAQGWRIrrlvrhgkspsgwhMFGMVICLMLVQVIIAVEWIILTVvrdrkpaCSYEPMDFVMVLIYVMVLMVA 205 African clawed ...
Feature 1                                     #  ##  #   #             ##  #  #   #              
Q9NZH0       214 TLGLALFTLCGKFkrwKLNGAFLLITAFLSVLIWVAWMTMYLfgnvklqqgDAWNDPTLAITLAASGWVFVIFHAIPEIH 293 human
EMP31525     206 TMGVSLFTLCGKFqkwKKNGGCLIITVFFSILIWVAWITMYLfgntelrkkDKWNDPTLAIALVSSGWVFVIFYAIPEVH 285 green seaturtle
Q4RJM3       205 ALTAASLALCGKTrqwRCNAIWLLVTCLLSLLLWVAWVGFYLygndwlgrsPDWDHPALAIALVAQGWLLLIFHAIPESH 284 spotted green p...
NP_001093384 206 TLGLSFFTLCGKFqkwKKNGICLIITTFLSVLIWVSWMTMYLygnnelkrsDQWNDPTLAIALISSGWVFLIFHAIIEVH 285 African clawed ...
Feature 1            
Q9NZH0       294 CTLL 297 human
EMP31525     286 CTIL 289 green seaturtle
Q4RJM3       285 ICLR 288 spotted green pufferfish
NP_001093384 286 CTIL 289 African clawed frog

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