Conserved Protein Domain Family
alpha_CA_VI

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cd03125: alpha_CA_VI 
Carbonic anhydrase alpha, isozyme VI. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidine residues. This sub-family comprises the secreted CA VI, which is found in saliva.
Statistics
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PSSM-Id: 239399
Aligned: 6 rows
Threshold Bit Score: 451.162
Created: 1-Nov-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
active sitezinc binding
Feature 1:active site [active site]
Evidence:
  • Comment:zinc binding histidines and other residues found to be important for enzymatic activity

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            #                       #
XP_425745  90 DEEHWGLHFAACAGKQQSPIDIQRRNVVHNAQLLQLELSGYSRPlQEDCTMTNNGHSVQIDLPPTLSISRGLprPYTAVQ 169 chicken
P18761     30 GESQWSEQYPSCGGERQSPIDVKTEEVMFNPSLKPLSLVNYEKE-NLEFTMTNNGHTVSIDLPPSMYLETSDgtEFISKA 108 house mouse
CAF93821   34 DQMHWPTKYPACGGKKQSPIDIQQRNVRFNPDMLQLELSGYDAQ-QGTFLMTNNGHTVQIDLPPTMVITEGLpgKYTAVQ 112 Tetraodon nigrovir...
AAH72918   35 DEANWGKKYPTCAAKHQSPIDIQRKKVRHNPELTQLELIGYDGPlTGHFKVTNNGHSVQIDLPSTMTIKKGLnsLYTAVQ 114 African clawed frog
XP_216584  30 EESRWPEKYPSCGGERQSPIDVKRREVHFSSSLLPLHMVNYEEE-GLELSMTNNGHTVQITLPNTMSMRDSDgtVYRTKQ 108 Norway rat
NP_001206  31 DEAHWPQHYPACGGQRQSPINLQRTKVRYNPSLKGLNMTGYETQ-AGEFPMVNNGHTVQISLPSTMRMTVADgtVYIAQQ 109 human
Feature 1      # #           #            #                                                   
XP_425745 170 MHLHWGGldletsGSEHTLDGMRYVAELHIVHYNSaDYSSFEEAKDKPNGLAVLAFLYVEGh-lENTYYSEFISKLAKI- 247 chicken
P18761    109 FHFHWGGrdwelsGSEHTIDGIRSIMEAHFVHFNK-EYGTYENAKDQKNGLAVLAVLFKIDeyaENTYYSDIISALKDI- 186 house mouse
CAF93821  113 MHLHWGGwdleasGAEHTIDGVRYMAELHVVHYNSdKYKSFIEARDKPDGLAVLAFFYDDGh-fENTYYSDFIANLGKI- 190 Tetraodon nigrovir...
AAH72918  115 MHLHWGGlesetsGSEHTIDGMRYLAELHIVHYNSgAYKSFDEAKDKPNGLAVLAFLYTTGn-yENTYYSDFISKLAKI- 192 African clawed frog
XP_216584 109 MHFHWGGrdseisGSEHTIDGMRHAIEIHLVHFNE-KYETYEKAVDQPDGLAVMAVLVKVEdytENDYYSTFISELENVk 187 Norway rat
NP_001206 110 MHFHWGGasseisGSEHTVDGIRHVIEIHIVHYNS-KYKSYDIAQDAPDGLAVLAAFVEVKnypENTYYSNFISHLANI- 187 human
Feature 1                                                                                     
XP_425745 248 -----------------------------------------------------------------------RFAGQSTKL 256 chicken
P18761    187 -----------------------------------------------------------------------EKPGETTTL 195 house mouse
CAF93821  191 -----------------------------------------------------------------------KYAGQSMYI 199 Tetraodon nigrovir...
AAH72918  193 -----------------------------------------------------------------------RYAGQETEM 201 African clawed frog
XP_216584 188 ytgkecpqeegcsskpgdsflaigsfilwsnpgdrfsfilwlrsadlnipeaepelsllgrqssflrnslsFLSGQTTTL 267 Norway rat
NP_001206 188 -----------------------------------------------------------------------KYPGQRTTL 196 human
Feature 1                            #                                                        
XP_425745 257 TSLDVQAMLPENLSHFYRYQGSLTTPPCSESVTWTIFDSPIVLSHTQIGLLENTLLNWHNRTLRNDYRHAQPLHGRVVEA 336 chicken
P18761    196 KDTTIRDLLPKDVHHYYTYPGSLTTPPCTENVQWFVLRDRVTLSKAQVVTIENSVMDHNNNTIQNGYRSTQPNNHRVVEA 275 house mouse
CAF93821  200 SSLDVRSMLPENLNHFFRYQGSLTTPPCYESILWTVFDTPITLSHNQIRKLESTLMDLDNKTLWNDYRIAQPLNDRVVES 279 Tetraodon nigrovir...
AAH72918  202 HTLDVMAMLPENLVNFYRYDGSLTTPPCTENVLWTVFDSPVFLSKTQIDLLENTLLDWHNKTLRNDYRHAQPWHDRTVEA 281 African clawed frog
XP_216584 268 RNVNIRNMLPGDIRHYYTYQGSLTTPPCTENVKWFVFQDSATISKAQAERIENAVMDHHNQTIRNGYRRTQPLHNRVVEA 347 Norway rat
NP_001206 197 TGLDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLSRTQVWKLENSLLDHRNKTIHNDYRRTQPLNHRVVES 276 human
Feature 1        
XP_425745 337 SFQ 339 chicken
P18761    276 NFL 278 house mouse
CAF93821  280 SFL 282 Tetraodon nigroviridis
AAH72918  282 SFH 284 African clawed frog
XP_216584 348 NFP 350 Norway rat
NP_001206 277 NFP 279 human

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