2KNQ,2QV8,4IPV


Conserved Protein Domain Family
GspH

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pfam12019: GspH 
Type II transport protein GspH
GspH is involved in bacterial type II export systems. Like all pilins, GspH has an N terminus alpha helix. This helix is followed by nine beta strands forming two beta sheets, one of five antiparallel strands and one of four antiparallel strands. GspH is a minor pseudopilin; it is expressed much less than other pseudopilins in the type II secretion pilus (major pilins). The function and localization of minor pseudo-pilins are still to be fully unraveled. It has been suggested that some minor pseudopilins may assemble either into the base or the tip of pili, or both. They function as initiators or regulators of pilus biogenesis and dynamics, and/or as adaptors between various pseudopilin component and other members of the T2SS.
Statistics
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PSSM-Id: 463433
Aligned: 273 rows
Threshold Bit Score: 29.4772
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2KNQ_A        16 TAARFTAALELAIDRATLSGQPVGihFS-DSAwri---------------mvpGKtpsawrWVPLq----EDAADESQND 75  Escherichia coli
WP_011830978  50 TAQVLQDGLRLAQAEAVRRNRTVSffLT-TAAnpdads---------tanangGN------WGVR----------VLPLT 103 Methylibium pet...
Q0K7V3        47 EADALASSLSLARASALSRNSWVT--VA-PVSnd-----------------wrNG------WTVC-----LNPNRNADCT 95  Cupriavidus nec...
Q2Y7S9        44 EAERLAQLLDLAGTEARMSGRSLA--WTtDGAsyr---------------fwgNQ------WGAGw----SEIRNNDLFG 96  Nitrosospira mu...
Q8Y1H4        45 LADRFASAASLARATARNR--RIWvhLG-PREaas---------------gwsAG------WALYttaspRTWAARTAPD 100 Ralstonia solan...
Q0K7U7        47 AADRLAASLALARATALARRLEVT--LQpLPGeat----------------lgPG------WQLV--------AADGDPD 94  Cupriavidus nec...
Q1LJW6        50 AADRLAASLALARTIAASRRVEVR--IG--PLagah--------------tldGG------WQLD-----------SDME 94  Cupriavidus met...
CBW75550     109 AARALARTLSLARSEAVARQAPVT--VC--RSdgagrcilpgrpcatgaldwsCG------WLVQ---------ARQPGV 169
WP_012536473  53 AAGKLQQDINWAKGYAIRSGYPVN--VS--VQ---------------------GGggsacaWTIS-----PTATGVLQNV 102 Acidithiobacillus
CAS:Atc_1420  50 ASGNLQQDLAWAEGYAIRSGYPVLvqIQ-SGGatg------------------------csWTLTpa-apNVSQAVPQMT 103
2KNQ_A        76 WDEELSIHLQPFKPDDSNQPQ------------VVILA-DG-------------QITPFSLL-MAn---AG---TGEPll 122 Escherichia coli
WP_011830978 104 GTTREFVRGGALAGVNNGVTItsa------stlVCFNA-AGqqvangtegcaidAGNPNAIYdVA----HA---GSDRpl 169 Methylibium pet...
Q0K7V3        96 GQAVLVQHVPSAQGLTVAFSStpq------sgvLSYSP-VGytrt------ladAMQSAQVL-MGl---GT---GNQK-- 153 Cupriavidus nec...
Q2Y7S9        97 ER--TFPQGMKIAGMLIEMSPadf-------mrLEFNP-HG-------------FMPAYAIK-IS---------FGTEry 143 Nitrosospira mu...
Q8Y1H4       101 TDDVLIAVSPPVVPSVDFAFIssqk----gvdtISYAP-VGysrt------sngAPLSGTLT-IA---------SGAHvr 159 Ralstonia solan...
Q0K7U7        95 RRAVLAVVEPGMPCLWVTLRQtarg-----tnvLKFLP-VGysrs------eqgGFQAATFT-LG---------CRGEqr 152 Cupriavidus nec...
Q1LJW6        95 PSLAVVRASDPCLRITLRSTAgpag-----aqsLRLTP-VGysrs------eqgGFLAATFQ-LR----CH---RAQR-- 152 Cupriavidus met...
CBW75550     170 GARPVVLHAQPAVSEVTITGStt---------eMRFLPpAGls---------vgTFRGFAVR-AA----RAsprIAAL-- 224
WP_012536473 103 PGMTPVQYASQYQNIPCTVLTgg---------tFSVTP-TGmvqn------pagTITSANIE-FQaggnNP---AEYGyw 162 Acidithiobacillus
CAS:Atc_1420 104 AA--SFASQYPNTSCTVLTGTtlssvvnvgptgMVYTP-GG-------------TITSAAVT-FGtggaNA---SSYGyw 163
2KNQ_A       123 TLVCSGSW 130 Escherichia coli
WP_011830978 170 RVIASLGG 177 Methylibium petroleiphilum
Q0K7V3       154 LIDISQLG 161 Cupriavidus necator H16
Q2Y7S9       144 TVTGSPVG 151 Nitrosospira multiformis ATCC 25196
Q8Y1H4       160 RVRINFAG 167 Ralstonia solanacearum
Q0K7U7       153 QVRLGAQG 160 Cupriavidus necator H16
Q1LJW6       153 QVRLGAQG 160 Cupriavidus metallidurans CH34
CBW75550     225 HVRLAAGG 232
WP_012536473 163 LIQVGGAG 170 Acidithiobacillus
CAS:Atc_1420 164 LVQLSGAG 171
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