Conserved Protein Domain Family
MFS_SLC46

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cd17386: MFS_SLC46 
Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters
The solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3) and similar proteins from insects and nematodes. The best-studied member is SLC46A1, also called proton-coupled folate transporter (PCFT), which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. SLC46A2, also called thymic stromal cotransporter protein (TSCOT), is a putative 12-transmembrane protein mainly expressed in the thymic cortex in a specific thymic epithelial cell (TEC) subpopulation. SLC46A3 is a lysosomal membrane protein that functions as a direct transporter of noncleavable antibody maytansine-based catabolites from the lysosome to the cytoplasm. The SLC46 family belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340944
Aligned: 11 rows
Threshold Bit Score: 291.104
Created: 14-Mar-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##  ##  #                                                             
Q7Z3Q1         3 ILFVEPAIFLSAFAMTLTGPLTTQYVyrriweetgnytfssdsnis-----------------------------ecekn 53  human
Q96NT5        22 RGPVEPLVFLANFALVLQGPLTTQYLwhrfsadlgyngtrqrg-----------------------------------gc 66  human
NP_149040     19 RTWVEPVVASSQVAASLYDAGLLLVVkasygtggssnhsa---------------------------------------- 58  human
NP_500781      7 MLGMEIPLFLYMLGSYLNYPVFQNLIyekeclikyqqnetf--------------------------------------c 48  Caenorhabditis ...
NP_505506     59 PVNVEPILFLVMCGFGLMTTNNSLFTywarcvqiaqthreladnat-----------------------------ytcas 109 Caenorhabditis ...
Q9VY22        69 NVTVEPILAAYIMPSVLSNLATQNLNlekacrvnmaygdevcda--------------------------------ltrr 116 fruit fly
Q961H2        51 WFILEPAVFLIFFARNLIGAVYQNQIlyqtcitiekfnatqcepl------------------------------lgidr 100 fruit fly
NP_724761     61 MYLLEPFILILLFAYNFSSTVLKNEViyqsctagfgypdsvcqll-------------------------------gtkn 109 fruit fly
NP_001137623  25 MFYIEPVVFMLLFSHTLSGTIQRNQViyqtctvifhynesdckql-------------------------------dvkn 73  fruit fly
NP_648899     54 STSVEPTMFLYMFAFMITSVVEQNFFlykscrvnrnfteeicr-----------------------------------nl 98  fruit fly
NP_731899     36 YLVIEPFFFFYFMASVFNAVAMQNFPldkacrvnlgynkivcdtmldkselgiecddfdfenttqgatpdladlvigatg 115 fruit fly
Feature 1                                          #                                             
Q7Z3Q1        54 ksspifafqeevqkKVSRFNLQMDISGLIPGLVSTFILLSISDHYGr-KFPMILSSVGALATSVWlcllcyf------af 126 human
Q96NT5        67 snrsadptmqevetLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGr-RPLLVLASLGLLLQALVsvfvvql------ql 139 human
NP_149040     59 spsprgaledqqqrAISNFYIIYNLVVGLSPLLSAYGLGWLSDRYHr-KISICMSLLGFLLSRLGlllkvll------dw 131 human
NP_500781     49 rnvsayyddkdiqaAANHFYFISSLTLLCPSLVTTLLLGAATDYWSi-KIPLIIPYIGCILGTINyvfqsyf-----iht 122 Caenorhabditis ...
NP_505506    110 iassngtlqddvekDIANTKIYLQIMGTIPTLIVSPLIGNWSDRNGr-KSPLLFSLFGLFINNFIllcatlty---etvn 185 Caenorhabditis ...
Q9VY22       117 qtanytleeetvqqMVARMAAWKTVIQSLFPCLLILFWGSWSDRHRrrKPCILIPVVGEFLGVVGlmlcvyfe----qap 192 fruit fly
Q961H2       101 gsdadkevevivqtYSANIMMTTSLLESIIPAFASLFLGPWSDKFGr-RPILLTTFTGYLTGALIlivityitr--stni 177 fruit fly
NP_724761    110 itnetkrieeqvqpYAAQVTLAMRLVECFIPAFCGLFAGSWADHYGr-KPLLMCSFLGYGLQYLIsaaiaycamytqglv 188 fruit fly
NP_001137623  74 asaeinaietelqpYVANLFLARTLLESIVPAFCGLFIGSWSDHYGr-KPLLIVSMIGFSASFLMmaaicelss--yyvv 150 fruit fly
NP_648899     99 nkpeneefrtkamlTNAWFLQWENISAHVFPIILALFLGSFSDRRGr-KLPLLMGLVGKFFYSTMivvnarmt----twp 173 fruit fly
NP_731899    116 fnytvckaeleaqiLAADVSGKRAPMAAIFPLIVLLFAGGWADRYNkrKPCMIMPIIGEALSFTCqiissiff---eslp 192 fruit fly
Feature 1                       ## ###  #                      #  ##  #                          
Q7Z3Q1       127 pfqlLIASTFIGAFCGNYTTFWGACFAYivdqckehkqktiriaiIDFLLGLVTGLTGLSSGYFire------------- 193 human
Q96NT5       140 hvgyFVLGRILCALLGDFGGLLAASFASvadvsssr-srtfrmalLEASIGVAGMLASLLGGHWlra------------- 205 human
NP_149040    132 pvevLYGAAALNGLFGGFSAFWSGVMALgslgsseg-rrsvrlilIDLMLGLAGFCGSMASGHLfkqmag---------h 201 human
NP_500781    123 svyfLLISDALFGLCGGFIAIISTTLTYgvktsmlr-yrsyriagVEGAIGLGGTVGFALSGTIrea------------- 188 Caenorhabditis ...
NP_505506    186 vyywFFISEFMLGMFGGGAATFSTSLAIvtddcrhklkpgsstvpFRVGLASFVQSIGMLNGTLivsllavpaiisverh 265 Caenorhabditis ...
Q9VY22       193 meaaALTEAIFPSLSGGWFTMLMGVFSYiadittee-drtlrigiLNVCFSVGVPIGMAFSGVLlkq------------- 258 fruit fly
Q961H2       178 spwwFLLSSVPSVVSGGTCALITGIYCYisdvaker-kkalrmvlNEASLCAGIMVGNVASGYIyaa------------- 243 fruit fly
NP_724761    189 spwwYVLSIVPLSCLGSSVTYSVAAVCFiadvsggk-vrsyrmiaYELAIYVGLLLGSLGSGYAyea------------- 254 fruit fly
NP_001137623 151 npwwYIMAAVPHSLLGGNCVFSVAAFCFisditdck-srpyrmifMESLFFIGLTSGSLLSSFVyaa------------- 216 fruit fly
NP_648899    174 vqniIYSATLPSALTGADVAIFASCFAYisdisslq-qrtirvtiLDVIYLSAMPMGVALGSHLfynvf----------- 241 fruit fly
NP_731899    193 mefgAYCEAIVPALFGGLTFCLMAIYSYitiatpee-drvfrfgiFAMFVTGVPFIGQPISGVLftt------------- 258 fruit fly
Feature 1                                                                                        
Q7Z3Q1       194 -lgfEWSFLIIAVSLAVNLIYILFFLgdpvkecssqnvtmscsegf---------------------------------- 238 human
Q96NT5       206 -qgyANPFWLALALLIAMTLYAAFCFgetlkepkstrlftfrh------------------------------------- 247 human
NP_149040    202 sgqgLILTACSVSCASFALLYSLLVLkvpesvakpsqelpavdtvsgtvgtyr--------------------------- 254 human
NP_500781    189 -cgyAVTFLIILGLQLLALLYLLGLAketkfepvrpdehtslisttg--------------------------------- 234 Caenorhabditis ...
NP_505506    266 alsyVECAFIQTALSLISLIYAIFFVrethfpkkedfsynqlneaeeveaeelp-------------------------- 319 Caenorhabditis ...
Q9VY22       259 -igfYGVFSISAAFYVIAFVYGFFFLeepqsrpeksaeqkslladff--------------------------------- 304 fruit fly
Q961H2       244 -tnaLVLFSIAGSLMMFALMYVLLFVpeslnpgdihtgsrvreffr---------------------------------- 288 fruit fly
NP_724761    255 -tdaYIVFSISAVCIFTALFLMALLLpeslparnrtlstpttdtsv---------------------------------- 299 fruit fly
NP_001137623 217 -vgsAATIGISGCIVTFATLFIIFFVpeslhfhkeqetknaitanvekecidskvpitacdlqldrvaidcppnfmndee 295 fruit fly
NP_648899    242 nqsyADMFTVNASLLALAIIYTLCALkwqttprqrslrelgccgfwgdf------------------------------- 290 fruit fly
NP_731899    259 -lgyTWSFASAIVFQLIAIFYIIFFIkevkttpttsttaneppplptslppkqqgadnmayettnldelqgnkn------ 331 fruit fly
Feature 1                                                                                        
Q7Z3Q1       239 -------------------------------------------------------knlfyrtymlfknasgkrrFLLCLL 263 human
Q96NT5       248 ---------------------------------------------------------hrsivqlyvapapeksrKHLALY 270 human
NP_149040    255 ------------------------------------------------tldpdqldqqyavghppspgkakphkTTIALL 286 human
NP_500781    235 -----------------------------------------------------kqlvavirefyrvitksrqfrLLLILN 261 Caenorhabditis ...
NP_505506    320 -----------------------------------------------pkiigmrrftsylenvfgvltvrrpgwTRLCLC 352 Caenorhabditis ...
Q9VY22       305 -----------------------------------------------------dkehvvqtfrvafkkgenqrrKRVILL 331 fruit fly
Q961H2       289 ------------------------------------------------------fdlvtdlirtcfkrrpnfdrTIIWLT 314 fruit fly
NP_724761    300 ------------------------------------------------------vsmlkslwstcskprehqnrFMLTTI 325 fruit fly
NP_001137623 296 pgkdkrmelptpatpamsfdddllakyverlpqkaeerkrqeaeeqakkaglfsmvhirdmistcfkrrdhharAIIWLV 375 fruit fly
NP_648899    291 ---------------------------------------------------fdkqhvkdslavlvkprkghrrsFLIILL 319 fruit fly
NP_731899    332 --------------------------vnfqltpqmepkvevvppkrsllkelfdptlvldcirfplvkrpnngrMLLILL 385 fruit fly
Feature 1           #  ##  ###  #                            #   #                               
Q7Z3Q1       264 LFTVITYFFVVIGIAPIFILyeldspLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCM------EDIHMAFIGIFTTMT 337 human
Q96NT5       271 SLAIFVVITVHFGAQDILTLyelstpLCWDSKLIGYGSAAQHLPYLTSLLALKLLQYCL------ADAWVAEIGLAFNIL 344 human
NP_149040    287 FVGAIIYDLAVVGTVDVIPLfvlrepLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCF------RDTTMIMIGMVSFGS 360 human
NP_500781    262 LLAFGLEMLVFSGLSDIQYSylr-ykLQWGDKKYGWFSGLSYGITTAAVLFLYPLLRMKl----mSDGMLATLGLFFKMI 336 Caenorhabditis ...
NP_505506    353 VSLAFVFIEFLSFDPALLLLlvkrlpFAWNDKLFSYFSLTRQLVNCFGMILCPILLTFShw--lgKDSLLIIAALACSAA 430 Caenorhabditis ...
Q9VY22       332 MIVVMVIIGPLHGEMAVTYLftr-frFNWSEVEFSFFSTYAMFTGLIGVIFCVGILSHKln---iDDALVGVLSSTSKIL 407 fruit fly
Q961H2       315 MIALTIAIFDMEGESTVNYMfvq-dkFNWTIKDFSLFNASRIVIQIVGSIVGMLVLRRVlk---mSIVTMAMLSLACCVL 390 fruit fly
NP_724761    326 MVVLLLTAFVSDGSNSVFYKfmr-ikFHWTVKQFTEYETVGILVPAVAGSGGVLFIWSLrkctnsAILWLALVSLLSHCS 404 fruit fly
NP_001137623 376 TLAMFLSIFVFDGVMTVMYLfvr-ekFHWTVRDYTFFETVSHLVPMIGALIGFLILRKVfr---lSVVTLALLAFFSEIL 451 fruit fly
NP_648899    320 VSMALYTFQRDEGQYLYMYTlg---kFDWDVSAYSNFKTFKSSAYVIAMLLAVPLMNKIlg---wRDTTIIFIGTWAHSI 393 fruit fly
NP_731899    386 LCAYFLTVGPTSGENDYWYRftl-kkLAWNGNDFSIYLTLSSGAALVGTFIGTAILSKLlk---vSDSMIGMLSALSIVC 461 fruit fly
Feature 1                              ##   #   #               #  ##  ##  #                     
Q7Z3Q1       338 GMAMTAFasttlmmflARVPFLFTIVPFSVLRSMLSKVVRSteqGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGF 417 human
Q96NT5       345 GMVVFAFatitplmftGYGLLFLSLVITPVIRAKLSKLVREteqGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGF 424 human
NP_149040    361 GALLLAFvketymfyiARAVMLFALIPVTTIRSAMSKLIKGssyGKVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGS 440 human
NP_500781    337 SLFMFAFlqnevmaysIAVIVMFNRFVSTGFRAFISSLIDMqeqGKIFSVISLLEGITTLVATSIYNNVYPNTLTFFPGL 416 Caenorhabditis ...
NP_505506    431 TSFLTAFatrtehifyTCIFGIVMGGMQPAYRSFLPRMVAKeetARLLTVVSIIISFSPILSSLIFNNIFNMTLTWWPGF 510 Caenorhabditis ...
Q9VY22       408 SSFVYAFatlpwhmylGGLVEIFNGTAFIAMRSIATKLVSKdelGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGA 487 fruit fly
Q961H2       391 ESTVRATavywqelylGMTLGMMRGVMGPMCRAILSHVAPAtevGKIFALTTSMESVSPLGAAPLYTTVYKATLENYPGA 470 fruit fly
NP_724761    405 SSLMKGFaleswqiyvAIGLGVFKSLVNPMCRTMITNLLPAderGKIFALLGVLQALSPLISSTLYVAIYTRTLNTEPGI 484 fruit fly
NP_001137623 452 NNLAKGFatmpwhmylSVTLGVFRSISGPMCRTIVSNIVPPsdlGKIFSIKNVLQSFAPFVAAPLYTLIYKRSLTTYPGL 531 fruit fly
NP_648899    394 ARLFFYFatntdllyaGAVVCSLGPIVGPMIRAMTSKIVPTserGKVFALLSVCDNAVPFISGVCYSQLYRRTQNTNHGG 473 fruit fly
NP_731899    462 SRVLFAFssstasfyvAGVVDMFVSLRVIAIKTIGSSIVAGdelSKMYSIFGISEPIAQFIFPPIFSEIYKSTVDSFPGA 541 fruit fly
Feature 1                            
Q7Z3Q1       418 TFLLSAGLLLLPAISLCVVK 437 human
Q96NT5       425 PFLLGAGLLLIPAVLIGMLE 444 human
NP_149040    441 CFALSSFLSFLAIIPISIVA 460 human
NP_500781    417 LYLISAVTLLIPLAIVSTSD 436 Caenorhabditis elegans
NP_505506    511 AFFVSGCFQITVFIGQLVIH 530 Caenorhabditis elegans
Q9VY22       488 FFLLGGGLTLFSVFIFLWMY 507 fruit fly
Q961H2       471 FNFISAALYFVCYILIAVIF 490 fruit fly
NP_724761    485 FNVFSAFLFGIGIILLGTVW 504 fruit fly
NP_001137623 532 FNFVSSFLYLLSFVFIGYVL 551 fruit fly
NP_648899    474 NVFILTIATQIAVFVMILCL 493 fruit fly
NP_731899    542 IWLFGEIFYIPNVLVFVVCY 561 fruit fly

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