1GS5


Conserved Protein Domain Family
AAK_NAGK-NC

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cd04249: AAK_NAGK-NC 
Click on image for an interactive view with Cn3D
AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Statistics
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PSSM-Id: 239782
Aligned: 7 rows
Threshold Bit Score: 371.746
Created: 15-May-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
N-acetyl-L-gl..nucleotide
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:N-acetyl-L-glutamate binding site [chemical binding site]
Evidence:
  • Structure:1GS5; Escherichia coli NAGK complexed with the substrate NAG and with the inert nucleotide substrate analog AMPPNP, showing contacts with NAG.
  • Comment:defined by 3.5 Angstrom contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                              ##                    #                  
1GS5_A        5 LIIKLGGVLLdseeaLERLFSALVnyreshQRPLVIVHGGGCVVDELMKGLNLPVKKkNGLRVTPADQIDIITGALaGTA 84  Escherichia coli
ZP_00733051   4 LVIKLGGILLdtpaaMENLFNALAkylqnsDRSLLIVHGGGCVVDDLMKRLNLPVRKkNGLRVTPSDQIDIIVGALaGIA 83  Actinobacillus s...
CAB95015     11 LVLKLGGALLenetaLEQLFTALSeykstsSRPLVLVHGGGCFVDELLAKMNIVSEKkNGLRITPFSDIGYITGALaGTA 90  Moritella profunda
AAO09821      9 LVIKLGGAALscsqtLSQLFGAIAsyqqkeQRQIVIVHGGGYLVDELMEKLQLPTVKkNGLRVTPYDQIPLIAGALaGTA 88  Vibrio vulnificu...
EAO67221      4 LVIKVGGAFMqataeALQLLTVIKql--qqSRPVVLVHGGGPMVEQLLQALQFTSTKvNGLRVTPPEHMPYITGALaGTA 81  Pseudoalteromona...
CAI87346      6 WVIKLGGAVLntenaAKALFSVLNeq---hNAQFVIVHGGGALVDTWLKDAGFASAKhQGLRISPKEQMPYIVGALaGCA 82  Pseudoalteromona...
YP_267219     9 LVIKIGGAILekesaLNALLNVISql---kNKQVVLVHGGGCVVDEMLAQAGFTTEKkHGLRVTPKEQVGLISGALaGTV 85  Colwellia psychr...
Feature 1                                                                                ## #   
1GS5_A       85 NKTLLAWAkkhqIAAVGLFLGDGDSVKVTQLdeELGHVGLAQPGSPKLINSLLEnGYLPVVSSIGvtdEGQLMNVNADQA 164 Escherichia coli
ZP_00733051  84 NKTLVAQAakfkLNPVGLCLGDGELTAAKQFdpELGHVAGVIARNPALLDNLLSgGFLPIISSIAvdeNGLLMNVNADQA 163 Actinobacillus s...
CAB95015     91 NKVLMAQGlksgAKVVGLSLADGGIATVTQStaGLGAVGECEAGDPTLLTALLSgGFLPIISSIGidaQGQLLNVNADQA 170 Moritella profunda
AAO09821     89 NKLLQGQAmadgLNAIGLSLADGGLCQVEELdpELGAVGKATPGDSSLLQTILNaGALPIISSIGltaQGQLMNVNADQA 168 Vibrio vulnificu...
EAO67221     82 NKQLCAFAiranTTPVGLCLADGAMTSCSVLdpALGAVGVAKANSPTMLNLLLEaNILPIISSIGadeKGNLLNVNADQA 161 Pseudoalteromona...
CAI87346     83 NKQLMSAAinagHKPVGLSLYEAGVTATQKLk-ALCLVGKCTSNDDSIINDLLKiGRMPIVSSIGfdlQGLWYNVNADEA 161 Pseudoalteromona...
YP_267219    86 NKAIVGTAnsmdLAAVGLSLNDGDMISCTLStqDLGQVGVPQTNNSKLLDCLLKaKFLPVISSIGaldNGDLVNVNADDA 165 Colwellia psychr...
Feature 1                                                                                       
1GS5_A      165 ATALAATLGADLILLSDVSGILDgkGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARtLGRPVDIAswrhaeqLP 244 Escherichia coli
ZP_00733051 164 ATAIASLIDADLVMLSDVDGVLDadKTLLSELNSAQIARLIENKVITDGMIVKVNAALDAAKiLNRGVDIAnwkypekLT 243 Actinobacillus s...
CAB95015    171 ATAICETLDADLVMLSDVAGILDadMQLIPEMNSNYAAELIAAGVINGGMEVKVKAALKAAAsLNRDIKLAswkvperLV 250 Moritella profunda
AAO09821    169 AVAVAGALDAQLVLLSDVSGVLDgkGHLIKSLNQQEADALIAGKVITDGMIVKVQAALEAANdLGRAIEVAtwrypenLE 248 Vibrio vulnificu...
EAO67221    162 ATVIAQLLNADLLLLSNVPGVLDhnKNLINQLTAKGIAELVESGVIIDGMQVKVDAALDAATsLQRPITIAswqtpeqLL 241 Pseudoalteromona...
CAI87346    162 AAAIANNLNAELIFMTDVEAVLDanKQPLHQLDTKHIDTLINEGVIVGGMEVKVKTSLHAAQhLRRGVYISswqkpenLT 241 Pseudoalteromona...
YP_267219   166 AVAICQLLNAELLLLTDVNGVKDadGEYLSSLNAEQAQKLIEQGVIAGGMTAKVNAALHAAQqLRRSIAVAswqspeqIT 245 Colwellia psychr...
Feature 1                   
1GS5_A      245 ALfngmpmGTRI 256 Escherichia coli
ZP_00733051 244 ALfageiiGTRI 255 Actinobacillus succinogenes 130Z
CAB95015    251 ALlngeveGTKV 262 Moritella profunda
AAO09821    249 KLfagesiGTQF 260 Vibrio vulnificus CMCP6
EAO67221    242 GLlagepvGTTI 253 Pseudoalteromonas atlantica T6c
CAI87346    242 ALlqgkhvGTKI 253 Pseudoalteromonas haloplanktis TAC125
YP_267219   246 QLldghgvGTQI 257 Colwellia psychrerythraea 34H

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