Conserved Protein Domain Family
YdjC_like_2

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cd10806: YdjC_like_2 
uncharacterized YdjC-like family proteins from eukaryotes
This eukaryotic subfamily contains hypothetical and uncharacterized proteins, and belongs to the YdjC-like family of uncharacterized proteins. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.
Statistics
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PSSM-Id: 212117
Aligned: 12 rows
Threshold Bit Score: 368.582
Created: 25-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to Thermus thermophilus YdjC-family protein TTHB029.
  • Comment:This site has a highly negative surface charge.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ## #                                                # #                   
Q569M2         8 KLVVTGDDFGYCPHRDKGIVDCFhaKVVTNVSLIINGSSAASAAsla----rryNIPIGLHANLSEGFPVcae------- 76  African clawed ...
A8MPS7         7 RLVVTADDFGYCPRRDEGIVEAFlaGAVTSVSLLVNGAATESAAela----rrhSIPTGLHANLSEGRPVgpa------- 75  human
A2BIR6         7 KLVVTGDDFGYCERRNQGIVDCFraGGISNVSLLVNAVSAKHAAdla----kryHMPIGLHANLSEGLPVsqe------- 75  zebrafish
XP_002167914   3 KIRITADDFGYCKQRNLGILETIdnGSVNSVSILMNGSDVIKLNk---------DVQKGLHVNLTEGTSTsek------- 66  green hydra
XP_001234391   5 KLIVTGDDFGYCPRRNQGIVECFlaGAVSNVSLLVNGSAAADAAkla----rryNIPIGLHANLSEGSPVsev------- 73  chicken
XP_002130895   3 RLLIVADDFGYGYQRNRGIVECFlkQSISAASILVNCKHSEDAVnla----llhNIPVSLHFNITQGKPTsdi------- 71  Ciona intestinalis
Q24CC0         8 KLVINADDFGWFQQRDAGIIEGFetGAISSTSAIANGNYLEESLnki----kdcNYGVGLHLNLTDGPPVyke------- 76  Tetrahymena the...
EFW42737       7 TLVVNADDLGIDAQRDLGIAQAIrnGVVRSASMIVNGASSESAAelfrrtdwpaRVSIGLHLNLTEGRTIatpslvrall 86  Capsaspora owcz...
EEN68294       3 KLVINADDFGYCPERNRGIVESYlhGDVTTASLMANADAAEDAVkla----tlhSIPLGLHLNLTEGRPVcnr------- 71  Florida lancelet
EDV24113       7 KLIVNGDDLGYCIPRDCGIIESFlqGMITSTSLLVNGQSAQYAIkac----rkhAIPIGLHANLTEGKPVnd-------- 74  Trichoplax adha...
EDO47462       9 YLIVNADDFGYCSKRNRGILQAFqkGVVTSISLMVNAESSVQAAela----kehGLPVGLHLNLSEGRPLvl-------- 76  starlet sea ane...
XP_002741791   8 HLVVTGDDFGYCPERNRGIIECFkrGVITGSSLLVNAVGFKDAVkla----kecRLPLGLHLNLTEGVPIs--------- 74  Saccoglossus ko...
Feature 1                                                                           # # #        
Q569M2        77 lkqNSSLINCQGFFhgkmgirk-------------mlsqgllNMSEVRKELCAQIKLFLELTGMNPQHMDSHQHVHVLPG 143 African clawed ...
A8MPS7        76 rrgASSLLGPEGFFlgkmgfre-------------avaagdvDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPG 142 human
A2BIR6        76 -lkGSTLLNKDGFFhgkmgfre-------------vlhsgqlKMSEVEAELRAQVNRFFELIGHMPYHMDGHQHVHVLPD 141 zebrafish
XP_002167914  67 -stVSTLLGPDQLFlgkfgfre-------------klcngeiSKNELRIEIESQIKAFINKYLHIPTHVDGHQHVHVLPL 132 green hydra
XP_001234391  74 lktNSSLLSEAGFFhgkmgfrt-------------alskgllNMSEVKQELKAQVDLFRELTGHLPPHMDGHQHVHVLPK 140 chicken
XP_002130895  72 -nkVRSLVGDDDMFlgksas----------------wkntsyLQSEIKLELSSQINWFERKFGRMPDRVDGHQHIHVHPM 134 Ciona intestinalis
Q24CC0        77 niaANSLVGKYMWYpndyedqiqidgfhglfplhsmikqnkiKEIDLENEIRAQIARFITLRGKLPTHIDGHKHIQMIPL 156 Tetrahymena the...
EFW42737      87 hesSEEMLGKFGFRdrlne-------------------qldgVIQATAIETRAQIQHFVMLMGSLPSHLDGHQHVHTIPE 147 Capsaspora owcz...
EEN68294      72 lreGSSLVDGDGWFhgklgvrk-------------aaysgglDATEVRDEIEAQLRWFVDQLGKLPTHIDGHNHVHVLPG 138 Florida lancelet
EDV24113      75 -ynYKTLTDHDNLFwgkfgfre-------------rltsgdiSLAEVEHEIEAQVVWFINHAKQLPTHVDGHQHCHVLPG 140 Trichoplax adha...
EDO47462      77 --gHKTLVDSDGFMkakeqlqk-------------llsqgiiDKKEIQQEIKAQLQWFQDHVGRNPTHVDGHQHVHVFPA 141 starlet sea ane...
XP_002741791  75 --gRSSLLDKDGFFldkcviqd-------------alrehkiNFDEVRNEMRAQIALFRQTLGYTPVYVDGHQHVHVFPG 139 Saccoglossus ko...
Feature 1                                                                                        
Q569M2       144 IREVFAQVLEE-HRIHYTRIPVElglyrctwipdtlme-fykgiekdalntveIFRKHGIRWPDLYIGLsTMGKNMSAyn 221 African clawed ...
A8MPS7       143 VCQVFAEALQA-YGVRFTRLPLErgvggctwleapara-facaverdaraavgPFSRHGLRWTDAFVGLsTCGRHMSAhr 220 human
A2BIR6       142 VREVFAQVLSD-FGITYTRVPIEpglrfcnflpshlre-fnaqvekdalesveVFHRNGIRWPDVYLGLsTMGKNMCLsn 219 zebrafish
XP_002167914 133 VRDLFAELLQK-YSIKETRIPYEigiidcewieeprlq-fykkvcedallakkVFNDYGISFSDYFIGLtTMSHDFTEvh 210 green hydra
XP_001234391 141 VRHVFAEVLEE-YGIEYTRVPVEpglhncdwiepsmmd-fyvgvekdslntvdVFTKHGIRWPDIYIGLsTMGKNMSVsa 218 chicken
XP_002130895 135 VRNAFAITLQE-RGIKHTRLPVEdissilhhgmpqsrlrfheqiqmeskiaalIFDQQCIKYTPHFIGLnFVGKAMNFtl 213 Ciona intestinalis
Q24CC0       157 VAKILGCIMTReFGIYKVRFSFDeseklskdm------------kfqyeesikIYKSYGINSTDYFFGKfGDGKFSKEni 224 Tetrahymena the...
EFW42737     148 LAETIAQICAE-VGITRTRIPSDnmqvqpwmdtqtprykflcmvaeqgrrsraIYASHGVSSTTSFIGLgLMGLDFTI-- 224 Capsaspora owcz...
EEN68294     139 VRDAFAAAAAA-AGVRWVRLPVQtdlptcdwvseaqqd-ffkeveddcrearqVFLQQGLRLTDSFVGLaTMGADMSVqh 216 Florida lancelet
EDV24113     141 INNVFASVISK-FDIRWTRMPVEknlescnwlteaqit-fytsvvheaissksVFENYGVKYTNYFGGLsLMGINLTKqr 218 Trichoplax adha...
EDO47462     142 VCEILAATMQQ-MGLKKTRNPVElslqscpwipqarle-ffngvvhnaaaaldVYSKAGISFPQRFVGLtTMGKNMTEer 219 starlet sea ane...
XP_002741791 140 ISQVFAEVLKE-HNITLTRFPIQynlekcswvleehkk-fnkvvqlyaqnaksIFQAHCIRYPLGYIGLsTMGEKMTVdr 217 Saccoglossus ko...
Feature 1                                                 #                          #           
Q569M2       222 iqeair-ygvcswqSTISTLPDInn--------sVSIELMTHPGYPSspeeggc--gegpddFSQSLDRLHELEVLKSAP 290 African clawed ...
A8MPS7       221 ------------vsGALARVLEGtla-----ghtLTAELMAHPGYPSvpptggc--gegpdaFSCSWERLHELRVLTAPT 281 human
A2BIR6       220 lkraleaslddgvsSPLILTQSNnaasn--cyrpVTAELMVHPGYPSqpqqggc--gegpddFSQSTDRLHELNTLRDPM 295 zebrafish
XP_002167914 211 fmia-----ikkikEDLIKNKKIrd--------nISIEVMVHPGYASenndggc--gggpdsFSLSNDREFEVNALTSKW 275 green hydra
XP_001234391 219 iq--------naidTAIVDFTSKvpahpvpqhrtVTIELMVHPGYPSvppiggc--gegpddFSQSWERLHELQTLIKPE 288 chicken
XP_002130895 214 ------------lqRSLANIYKNkr--------sAICELMCHPGYRCdknsdgflhettaddFSCSPDREHELKVLTSNA 273 Ciona intestinalis
Q24CC0       225 -------------iKSLDTFRNKlkk-----stnISVEMMCHVGYPSvnp---------pkcFSSSQQRVKELRILQDDS 277 Tetrahymena the...
EFW42737     225 --------------ERMCERLGScp--------dGTIEWMCHPGLSSteg----------ddFNQSPDRPLELKWLCSTQ 272 Capsaspora owcz...
EEN68294     217 ------------lcDSLQAAYQSadrs---ptnhVTCEVMVHPGYPSmlgcggc--gqgpddFSLSHDRRHEMTVLGDGR 279 Florida lancelet
EDV24113     219 ii---------dwiDQIINEKANhsvn----ndsVTCELMVHPGYPCkgdggc---gqppdsFSKSPAREHEMEMMKDRT 282 Trichoplax adha...
EDO47462     220 ------------lqQALSTAFKCqttfp-dnrwsNTCELMVHPGYAStagcggc--gggpdeFAQSLDREHELHILTSES 284 starlet sea ane...
XP_002741791 218 ie--------salsSSLYNLKKSke-------sfLTFELMTHPGYPSmngyggc--ghgpdkFSCSQDRVHEISILQDER 280 Saccoglossus ko...
Feature 1             
Q569M2       291 LRNFF 295 African clawed frog
A8MPS7       282 LRAQL 286 human
A2BIR6       296 VLNFY 300 zebrafish
XP_002167914 276 FKNFL 280 green hydra
XP_001234391 289 LQSHY 293 chicken
XP_002130895 274 MAAFY 278 Ciona intestinalis
Q24CC0       278 LQNYI 282 Tetrahymena thermophila SB210
EFW42737     273 LRETL 277 Capsaspora owczarzaki ATCC 30864
EEN68294     280 LKKFY 284 Florida lancelet
EDV24113     283 LRTLL 287 Trichoplax adhaerens
EDO47462     285 FRSFL 289 starlet sea anemone
XP_002741791 281 LKMVY 285 Saccoglossus kowalevskii

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