Conserved Protein Domain Family
DNA_processg_A

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pfam02481: DNA_processg_A 
DNA recombination-mediator protein A
The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.
Statistics
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PSSM-Id: 426793
Aligned: 52 rows
Threshold Bit Score: 198.915
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8FP68          72 QiLALGG-RLIT-PEDREWPATELDhAfgfaasgmsdHvrtyqDdavPPHALWVRGg-DLRSLT--AQAVALVGTRAVSQ 146 Corynebacteri...
Q7UEW1         156 W-CAAMDvNILR-RGQASYPAAMEE-L----------D-----D---APPLMFCRG----SILPrdTISVAIVGTRHATA 210 Pirellula sp.
WP_020464145    77 T-ATDAGwRFVI-PSDPGWPATLTPgT----------G-----P---LPVGLWARGtgDLTGLT--RRSVTITGARLCSE 134 Frankia sp. E...
Q8G5R7         138 W-FTMDGtQWIIgPGHPCWPSQLAD-L----------SirsdwA---PPLCLWIKG--DPRALTscAKPVGIVGSRDVTE 200 Bifidobacteri...
Q5SM22          53 graEALGvRLLG-LWEEGFPEGLRA-L----------P-----Q---PPTHLYLKG--ELPPE---REAVALVGTRRASP 107 Thermus therm...
LANL:CH45_3379  65 ewlSDPNhHLLT-YGEPGYPPRLVH-I----------A-----G---APLVLFVSG--ELDVLY--RPQIAMVGSRHFSH 120
Q1AW70          74 E-LAGRGiSVLT-PADAAYPHALRE-I----------P-----D---PPPALFVDG--ALPVG----EAVAVVGSRKPSP 126 Rubrobacter x...
O83408          77 T-MRCYQiKMVF-KDDDAFPSWLRE-I----------S-----D---VPFVLFYRG--TLPCATq--PIVGMVGTRTPTG 131 Treponema pal...
WP_014960048    76 dkAKRLGiMMIA-IDEPAYPEILLR-L----------P-----D---PPLVLFLRG--VLPE----RPGIAMVGTRRPTV 129 Leptospirillu...
Q3AB69          68 H-CSNLGiKIVT-FGEKRYPERLLH-L----------Y-----D---PPVVLFCWG--NLELLk--tPMVGIVGARRASS 122 Carboxydother...
Q8FP68         147 YGREVTAMIVDNLVPH-----QWTIISGGALGVDTVAHTTALRAG--------GTTVVVAACGLDRSYPAHNRGLFEEVV 213 Corynebacteri...
Q7UEW1         211 YGLQQTRRIAMDLARA-----GVTIVSGLARGVDTAAHRAALEAE--------GRTIAVLGGGLGKIYPAENSPLADKIS 277 Pirellula sp.
WP_020464145   135 YGQAVTAGLAYDLTTPlaaqpVTITAAGIGEGIDAAALRIAATH---------RRAVAVLTATT--GITRYNRTLLTDVA 203 Frankia sp. E...
Q8G5R7         201 YGRYVAHTVAEQAAVA-----GHLVVSGGAMGTDAAAHWGALNALhgrmpanvGKTVAVFAGGLNHIGPMRNRTLFERIE 275 Bifidobacteri...
Q5SM22         108 WALAFARRLARELAEA-----GLWVVSGLARGIDREAHLGALEAG--------GRTLGVLGSALDRVYPPENRPLAQRMD 174 Thermus therm...
LANL:CH45_3379 121 YGEQWGRYFASELART-----GLVITSGLAVGIDGICHQAALNIQ--------GRTIAVLGSGLENIYPQRHSRLAKEIE 187
Q1AW70         127 GGLEVARRLGRALAGR-----GVCVISGLALGVDAAAHEGALLAG--------GPTVGVLGCGIDVVYPRVNARLFGEVR 193 Rubrobacter x...
O83408         132 EGVRNSLAFSKACAES-----GIAIVSGLARGIDGFCHKGALAGG--------GYTLAVLACGVDQLYPRSNSALAARII 198 Treponema pal...
WP_014960048   130 EARRGFESLSAGLSRF-----GFPIVSGLAAGLDAAAHRGALLGK--------GTTIAVVGTGLDRVYPDVHRTLAEEIL 196 Leptospirillu...
Q3AB69         123 YGLKVARAFAEEIAGA-----GITVISGLARGIDGEAHRGAVSA---------GATVAVLGSGIDVPYPRENENLYREII 188 Carboxydother...
Q8FP68         214 NRGGAIVTEYPPGTPPQRHRFLTRNRLVAALSQGTVVTEAAWRSGALNTLSWCAGLGRVAMAvpgpvTTAGSLGCHERIR 293 Corynebacteri...
Q7UEW1         278 EH-GAVISEYAPMAQPRGGMFPQRNRIIAALGQATLVIEAPMRSGSLITARLASELGHSVGAlpgqvNSRASQGCHHLIR 356 Pirellula sp.
WP_020464145   204 -DGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLVESTTRGYAFATAQAARLRRRPVMAvpgpiGSTLSAGPNALLT 282 Frankia sp. E...
Q8G5R7         276 AQGGALISELCPGTIPEARRFLLRNRIIAAMSSTLIVTQARLRSGALNTAGWACELLREVYAvpgdiNQPCNAGCNKMIG 355 Bifidobacteri...
Q5SM22         175 -----LLSEFPFGTGPKPEFFPRRNRLIAGLCRAVVVVEAPLDSGALITARHALELGKEVLAvpgrpTDERSLGANRLIQ 249 Thermus therm...
LANL:CH45_3379 188 YQGGALVSEFLTTALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLITARYAMDQGRDVFAlpgplGSASSEGTHWLIQ 267
Q1AW70         194 AA-GGIVSEYYLGEPPLAWRFPARNRIIAGLARVVVVVEAAERSGALITARHALESGRDVWAvpgpvGFAGCRGSNRLLA 272 Rubrobacter x...
O83408         199 ETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPKKSGALITALCALEQGRDVYVyepllESLQNEGGRLLHA 278 Treponema pal...
WP_014960048   197 ANGGGIVSEFPPGSPPDGWHFPFRNRIVVGLSAGVVAGSHRRASGTSVTVRRALGEGREVVVydrgaFGDTKEGPEALLE 276 Leptospirillu...
Q3AB69         189 QK-GLIISEFLPGTMPLPYLFPIRNRLIAALAEGIVVVEAALKSGSLITARIALELGREVFAvpgmiTSPLSAGSNLLLK 267 Carboxydother...
Q8FP68         294 NGhaQMVCS 302 Corynebacterium efficiens
Q7UEW1         357 DGa-TLVQH 364 Pirellula sp.
WP_020464145   283 EGtaRLVTS 291 Frankia sp. EAN1pec
Q8G5R7         356 DHraMILCA 364 Bifidobacterium longum
Q5SM22         250 DGa-YPVls 257 Thermus thermophilus HB8
LANL:CH45_3379 268 QGa-YLATs 275
Q1AW70         273 DGa-GVLWD 280 Rubrobacter xylanophilus DSM 9941
O83408         279 EGa-RALTC 286 Treponema pallidum
WP_014960048   277 QGa-RRVSs 284 Leptospirillum ferriphilum
Q3AB69         268 DGa-RIALK 275 Carboxydothermus hydrogenoformans Z-2901
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