Conserved Protein Domain Family
YpbB

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COG4955: YpbB 
Uncharacterized conserved protein YpbB, contains C-terminal HTH domain [Function unknown]
Statistics
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PSSM-Id: 443982
Aligned: 51 rows
Threshold Bit Score: 230.286
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012686114  14 LCAVALNAMLPLANERTLQSAYYILRGRKANQTLQDVHLYTLYPYYRMFSRFPREDWEKIVSTLFQARWILPVDAVgins 93 
WP_005713853   2 LTDLAIQFFD--TQPRRERAVFGLLAGKKTISNLYAALTHQQLQWLQLYPSLSKELFLQAVAQLKMHGQLTTTET----- 74 
WP_010991729   4 LDNYIVTILEKSITPRKSPFLHTILAGRRTGQAVQDAHLFQMQHLFGLVPNLKLNYLETRLKELMRQGIITVTEN----- 78 
NP_465467      4 LDNYIVTILEKSITPRKLPFLHTVLAGRRTGQAVQDIHLFQMQHLFGLVPNLKANYLEKRLLELVHQGSIISTEN----- 78 
WP_013989820   2 TPEFLLMCFDM-KQPRRQRVIFGLLTNHLTVSTSFNGLAYQLFALINFQPQLTKEQYDLLIQKLIKQNALQEVEPG---- 76 
WP_014215368   3 SREVLLFFFDE-QQPRRQKNIYNVLRGVSTVSNLFWAQQYNLLDFWRYYPHLELNEYSQIIREAIETGNLLKVGDN---- 77 
WP_015076253   7 LDYLLFSFFST-SEPRKAMTVFHIISGKRTASILYQAEIYRLSAYFSLFNKLKKEHYQHSLKKGIALKILKKEEND---- 81 
WP_015380395   2 FTDYVLLLFS--TTPRRAKGLFNVLRGRRTVSTLFAGLTAGYLDLLDSCHEVPLEDFMAATVALTENGQLTSTATG---- 75 
WP_072694692   8 ITYFILSLFNK-DSPLSSAQLIHIFHGRRTPSMLFKVEREKLYTPFGLFKTLTKDKLDQYLNELIKLKWLDINENN---- 82 
WP_062468465   6 IDYLFLDLFSI-DESRKPNTLYHVLNGKRTVSVLLQTMKMDLTAFFHLFPKLTLTDFESHIKEFQKRKLVTE-------- 76 
WP_012686114  94 kpTFTFSDTGLqhakhmyqkyrfdvwfapftqsdlaeriepFWNRLHLMVQTISQMHQGDLGFIPVVSDKPAQRWVKNQL 173
WP_005713853  75 --GLVLTAKGQqfqrqaakrvpl------ptyyqpwmhlakFAPRFFLAIQVLSEASYHSQAYRPISTDWANQQAVKRWY 146
WP_010991729  79 --GYTVKQKPNfsfemsfpsfh---------gfafqqqvfaFFAHLRLAVQVVSNKHHAEKYYLPVIRDKKVQQFIKIWL 147
NP_465467     79 --GYVTQGQLVatfendypnfq---------gftfqrqafaFFSHLRLAVQVVSNIHHHESYYLPVIRDKKAQQFIKHWL 147
WP_013989820  77 --MFIKTDQGQkileeaqldhyyp----rfflysgetnlfeFREMFLLANQAVSEYSFQNNKYYPISNRLKLRGLVKQWF 150
WP_014215368  78 --KLIRGANLEivssnvehg------------lqsyfdfdkLIQLIELAVQVVSELSFQNKFYSPSIDDMELLWQIKIWL 143
WP_015076253  82 --YYCLTEMGQkeitayfekqyypt---elnflqngrwihvYWRRLVFVSQVLSEIRYKNQSYIPIEKEWSLQVWVKKWL 156
WP_015380395  76 --CWQLTQTGEqrqaklrqtlymp----qnfevfqttdvrrFRIVSKLALQVVSELVHHNRHYYPVTTDPGIQAQVKQWL 149
WP_072694692  83 --GYILSDNGSlalekyfsdkdypa---kivslenatirtpFFYQFQLVSQIFSEAIYNNKQYRPTIKDPIHQTAVKEWL 157
WP_062468465  77 --NYCLTQKGLeakriffrthrqvv---ekqrlkyarvlpqFISRTLFLTQVLSELRYQNKNYLPIQARASEQLWIKSFL 151
WP_012686114 174 SDGTLr---HAWKQQLSDELYRLWEPLDEG-VQELLFCQLSGVGQVGKTMGQVAEIRQTSRSYLMLQFRYGLAASIQTLL 249
WP_005713853 147 RQLNIe--------sAIADLIALFERLPPQ-LADILAANLIGHDYAGQA--------QPPTLSAHFSRINALAALVNEIA 209
WP_010991729 148 QNQQQ----EDLADRLYIELIKWFNSLAVS-RPEFLVERFSGGKLMGYTTEQIATKYQVEKWDVYFEVLHELHRLIAAIK 222
NP_465467    148 KYQDK----TNLADKLYGELFAWMNKLAVA-RPAFLVERFSGGELMGYTTEQIASKYQVEKWDVYFEVLHEVHRLLTEMK 222
WP_013989820 151 QSQKQn----dLTFNWVQELQRFLRTLTDW-DADRLVNTWTGYQQPGLRADQLQFPMSWNDQDVYFWELDQYAKLVKFLE 225
WP_014215368 144 NHVKTkdniSEFVAKFQSELTVIGTNLPEE-NSVLLFNQFVGHKHVGLTTEQLSRALNIAAFEIDFRIRETFLEVINIVE 222
WP_015076253 157 KSKSEs--rEELAEAFGIEWLQLARNQSKI-SAEIMIGFLTGHDYYGQTTMQLATAFLKEAVEVRIILLDGLSKLIHEVT 233
WP_015380395 150 RQQSK----VELGEQIHAALTAFLTSLADPeLPTVFVQGITGYQEPGLTNEQLAAQLGRQPWEASLMHTDVICQWIAWIQ 225
WP_072694692 158 ATLDEs--lHNLSKCWSNELSLVLENLTEE-EALILVWKLTGHELVGKTNRQLAESFSLDTVELYILLNQAVEQLIDLIE 234
WP_062468465 152 DKNRLg--kDEIGKQFGIEWLEIIKKSQIK-QPPLFLEQLEGHDKSRKTWRQIAIDNHLDESELYVYFQEDWLKIITCIE 228
WP_012686114 250 AESNhYPLLSKLVTesh-klDPRL-TESAARTYAMLQTGCDKKEIAKRRQMKESTIEDHLVEIALRCP--EWDMTTYLPN 325
WP_005713853 210 AIKDeGNPWYELWGg----pQDLV-TRPARYSLQQVQAGVGLKAIASKSHRKLSTVKEHLLLAAIMGE--SLPVEELIPQ 282
WP_010991729 223 ESEEeWPLLASLIPn----eLMSL-TSSAIKTYTLWAKGMDLEMIERIRNLKTSTIQDHFVEIRATLK--EAQV-PYLPE 294
NP_465467    223 KKPEeWPILASLVPd----eLNGL-TSSAMQTYVLWQNGADLEAIERIRNLKKSTIHDHFVEIRATLK--EANV-PYLPE 294
WP_013989820 226 QAGNqY-LLKQLWNllk-qtQQLL-SSSMLQTYQAYENGIALDKISQIRRLKLGTVREHLLSAAIFMPfeQFDYQQLLTP 302
WP_014215368 223 NKK--LPLFSALITpv--qsSSKL-THSALISWNLFKNGTEIPKIASLRRIKENTVREHLMMAAILEA--DFPFEKFIDL 295
WP_015076253 234 EQPEtFPIFFSIFTdll-etHGAV-SQSVRQTQKNLMEGLDLIEIAKIRQLKLSTVSEHVIELSLIDK--KFNVHSLIKK 309
WP_015380395 226 RHPRd--PFAQLLSvl--tqASAI-SQSAEQTYQAFLKTQQLAAIAQTRHLKMSTVREHLLEVAIWSP--DFPFEMVLNH 298
WP_072694692 235 KSE--YTLLKSFLHqtkknyYYGL-SRSTYLTASYIRKGNNLADIAFKRNLKLSTIQEHILEITLVKQ--SFNFRPFIPE 309
WP_062468465 229 DNELfFPLFTAILKel--thKAGLcSTSAQETYQLWVQGRSALDIVRERRLKPSTINDHFTEIALFYR--DFPFEQFLTV 304
WP_012686114 326 ELAKEIVETSERL---DTSR-LRLIKDQLEaTVTYLQIRLALARATRGAK 371
WP_005713853 283 ----PIHQALDQI---DQWQdHQVLLDTVP-ATDFFQVRLFQILKLQGRW 324
WP_010991729 295 ---EELIQSINSR---NWHL-LRDIKAAFP-DLDYYQIRLAVVSKEDEQ- 335
NP_465467    295 ---EAIIQTIITK---KWNL-LREIKAEFP-DLDYYQIRLAVVSREGEQ- 335
WP_013989820 303 ELIAYFEEKLVGAp--ESWS-FQQVRVTGA-PDEFFYFRLYQIQQVKKEL 348
WP_014215368 296 DLFLDEFDLNSKKp--DEWT-YQMVLQKDA-SVSFFSFRLAQIKQGQLNY 341
WP_015076253 310 QPFLEVKQQLENQ---PMSS-FPDIKEIFP-EVPFYVYRLMQIERWREKN 354
WP_015380395 299 ELTQQLTTIFAAQsdiANWS-FQEVQAALP-TLDFFEFRLFQIMRCQHVR 346
WP_072694692 310 KIYIQLHQSFETN---PYFS-FQKAKQENS-NIQFMWYRLVEIERIRNES 354
WP_062468465 305 EQIQFVEHRPSPN---SNLT-HEMIKERFP-DIPFFQSRLMQVKGDSIKW 349
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