Conserved Protein Domain Family
BC10

?
pfam06726: BC10 
Bladder cancer-related protein BC10
This family consists of a series of short proteins of around 90 residues in length. The human protein BC10 has been implicated in bladder cancer where the transcription of the gene coding for this protein is nearly completely abolished in highly invasive transitional cell carcinomas (TCCs). The protein is a small globular protein containing two transmembrane helices, and it is a multiply edited transcript. All the editing sites are found in either the 5'-UTR or the N-terminal section of the protein, which is predicted to be outside the membrane. The three coding edits are all non-synonymous and predicted to encode exposed residues. The function of this family is unknown.
Statistics
?
PSSM-Id: 369052
Aligned: 11 rows
Threshold Bit Score: 52.0426
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
YP_918990      1 MLRLHFNKSNGIYSVRdSGRSLVKATEKHAViPKVLGATIELAPRVHAVITTGLFKEATTgsRPFIPVL 69 
Q5BS74         1 MFCLQLLIPLLFLPKP-SNPAADIHHAIYIL-LFLICFFLERKPCGICAIILFVFIILPC--YSSLDNF 65  Schistosoma japonicum
Q7PNT1         1 MYCLQCLIPVLLIPKP-TNPALMQTHVMFIV-LYLIGFFLERKPCTICSLVFLMAVFLIC--NSGVGNC 65  Anopheles gambiae str. PEST
XP_003904818   1 MYCLQWLLPVLLIPKP-LNPALWFSHSMFMG-FYLLSFLLERKPCTICALVFLAALFLIC--YSCWGNC 65 
Q8MXX3         1 MYCLQWLLPVLLLPCP-ANPALYWNHFMFLG-LYLTSFYVKHRPCIICSLVFFITMFMIS--YSNCHLF 65  vase tunicate
Q7SBZ2         1 MFCLRSWLPLLFIP--------TNASPAFIL-VFFICTYFLNRPCIYCSFLLVILFLT----SCNWSDR 56  Neurospora crassa
XP_001727900   1 MFCLRSWLPLLFIP--------TNASPLFIV-SFVTLTYILHRPCIYCSALLLILFIS----SCHWSDR 56 
XP_011388221   1 MYCLRWWIPLFLLPFP-------KASPLFLV-LFLFSFALHSQPCMYCALILTGLVTT----SPNWYGP 57 
Q9P6M5         1 MLCLRYFIPMLLVA---------NAAPYFFYpIFMLSMIARKYPCPYCMIILGLLINT----RTLWSDS 56  Schizosaccharomyces pombe ...
Q6WY51         1 MFRLHYNKSVKNFTVRrADRSIVCASECRAK-IPLIGNTVPLAPSVHIIITRGDFEKAIDkkRPVLSVA 68  Enterobacteria phage T7
Q778M2         1 M-RLHFNTSNGIFSVRrEDRSTAVASERNAK-LPLIGSVVPLSPRVHLLITRGEFIKAMNkeRPHLEAV 67  Enterobacteria phage T3
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap