Conserved Protein Domain Family
ceo_syn

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cd12181: ceo_syn 
N(5)-(carboxyethyl)ornithine synthase
N(5)-(carboxyethyl)ornithine synthase (ceo_syn) catalyzes the NADP-dependent conversion of N5-(L-1-carboxyethyl)-L-ornithine to L-ornithine + pyruvate. Ornithine plays a key role in the urea cycle, which in mammals is used in arginine biosynthesis, and is a precursor in polyamine synthesis. ceo_syn is related to the NAD-dependent L-alanine dehydrogenases. Like formate dehydrogenase and related enzymes, ceo_syn is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. These ceo_syn proteins have a partially conserved NAD-binding motif and active site residues that are characteristic of related enzymes such as Saccharopine Dehydrogenase.
Statistics
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PSSM-Id: 240658
Aligned: 24 rows
Threshold Bit Score: 370.022
Created: 11-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative NAD(P) binding site [chemical binding site]
Evidence:
  • Comment:based on the binding of related proteins to NAD(P) and/or derivatives
  • Comment:GxGxxG(17-18x)D is the characteristic NAD binding site motif of FHD-like proteins
  • Citation:PMID 9761911

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
ADX67668      2 KTVGFPISQKnNEKRRCLIPSDIAKIk-hKKQIYIETGYGDvLGYSDEDYLQAGVNVvs-qeEVLSKDIICDGKIGDA-A 78  Weeksella virosa...
NP_781075     2 RSIGFLISPKeNENRRALLPVDVEKIq-nKESLYFQKGYGEvLGISDYEYLKAGANIas-kdDILKKDIICDPKIGDA-G 78  Clostridium teta...
AEB30912      7 KTIGFVNSHKtGEKRIALLPKDITRIn-hREALFFEEGYGNgLNISDTEYAALGCQVvp-rnVALEQDIICDPKIGDA-T 83  Carnobacterium s...
EET81503      2 KTLGFPISDKlNEKRRALIPSHIERIk-kPEKIYIEKGYGEvLGYSDEEYLSCGVNIvn-rqLVLKQDIICDPKIGDA-T 78  Acinetobacter ra...
ZP_09447531   4 KSVGFPLSTKeNEKRIVLIPRDIRKMk-yPQELYFEKGYGYnFGISDDEYRNLGCHIas-rdDILKQAIVCGVKIGEE-K 80  Lactobacillus ma...
P15244        1 MKIGLVKANFpGERRVPLLPKDIKDF---KNEILVEEGFGKfLDIDDQEYSDKGCHIlsraeVFAESEAIFSLKLIQPtD 77  Lactococcus lact...
EGA90049     17 YTIGFVISHKnNEKRRALLPKDMPNIk-nIEQLFFEVGYGEaLGYSDAEYEVSGAQFvs-reEVLKCDAIVDVKLGNA-D 93  Planococcus dong...
A5HZ59        1 MKLGFLIPNHpNEKRVALLPEHVKGF---NNELVIETGFGEtLGISDAEYVKVGCTIasreeIFKTCEGIFSLKVLKPqD 77  Clostridium botu...
EEG47467      2 RTIGFVNSHKeNERRIALLPEDLDKLsdiASQIVFEKGYASrMGVSDEEYLSRGAKIlsreeILNKCDIICDPKAGDA-E 80  Blautia hydrogen...
BAK58718      1 MILGFIKANFpEERRVPLLPQDIKDF---DNQLLIESGFGEfLDIEDVEYEKVGCKVlsreeVFKQSEAIFSLKLIQPsD 77  Lactococcus garv...
Feature 1                                                                                       
ADX67668     79 YLPQLk-NQTIYGWVHAVQNRDITDIMIDN-----------SLTAYAWEDMFEd----GRHTFWRNNEIAGEAAIMHAYT 142 Weeksella virosa...
NP_781075    79 YLSKLkeNQILFGWIHAVQNLNITNILLRN-----------KVKCIAWEDMYEe----GRHVFWRNNEIAGEAAIMQAFQ 143 Clostridium teta...
AEB30912     84 FINNLypGQTLFGWVHAVQSKEVTDILIAN-----------ELSAYAWEDMYEd----NRHSYWRNNELAGEASVMHAYQ 148 Carnobacterium s...
EET81503     79 YLDQLy-DQTIFGWVHAVQNKDITEKLISK-----------NLTAIAWEDMFEk----GRHVFWRNNEIAGEAAIVHAYT 142 Acinetobacter ra...
ZP_09447531  81 YIQNLssGQTIFGWIHAMQDNDVTKNILKL-----------NLRIFAWEKMFDq----GRHVFWKNNILAGEAAVIHAFQ 145 Lactobacillus ma...
P15244       78 YYHLRe-GQMIIGWTHPFGSGQSFMKEQALpkklivvdldsNSPCIYYENEIFes-giPKGLLYKNSFYAGYAGVLDALL 155 Lactococcus lact...
EGA90049     94 YFDQLtpGKLLIGWAHAVQDIAFTDSVLAG-----------DHTVVAWEEMFEd----GRYIFYRNREVAGEAAVLQAYQ 158 Planococcus dong...
A5HZ59       78 YKHIRe-GQIIVGWTHPEGSGKIFMEEQGIpknliivdldnIHPSIYYKDYVIpmewiPSNFVRKNSYIAGYASTMHAVM 156 Clostridium botu...
EEG47467     81 YLEDLqeGRTIFGWVHPHVCENVKNLLLKK-----------HFEVYAWEEMMEd----GMQVFYRNNELAGEAAVNHGCQ 145 Blautia hydrogen...
BAK58718     78 YDYIKk-GQIIIGWTHPYGSGKSFMKEQAVpkelivvdldnNFPAIYYMDKVIet-kiPAGIMERNSFFAGYAGTLDALL 155 Lactococcus garv...
Feature 1                      # ##                   ###                 ###                   
ADX67668    143 LYGVFPy-DTKVAIIGRGNIGKGALKILtFMGADVTVYDRKTEKLFQkeLEQYDVIVNCILWDTkrtDHIIYKQDLKRMK 221 Weeksella virosa...
NP_781075   144 CYGKFPy-ETKAAILGRGNTAKGAYRILnGLGSEVTVYGSKLENLFKieMHKYDVIINAVLWDVkrrDHIINKDDLKKLK 222 Clostridium teta...
AEB30912    149 LNGIMPy-DTKVAILGRGNTARGAQRILiGLGADVRMYNRNQEKLFQkeMTEFDVIVNAILWDTsrtDHLIYQTDLKRFK 227 Carnobacterium s...
EET81503    143 LHGLFPy-NTKVALLGRGNIARGALKILtMMGADITVYDRRTEQLLRdeIGKYDVFVNAILWDTsrkDHIIYKDDLSKMK 221 Acinetobacter ra...
ZP_09447531 146 CYGRLPr-ETKVAVIGRGNTARGALRALdSLNAEAVQYNRRTVNILKsnLADFDVIVNCVLWDSdeqDHIIYKTDLKRMK 224 Lactobacillus ma...
P15244      156 QYGLIPteETKIAILGSGNVAQGAFSSIsKYSSNIRMYYRKTMSIFKenYTKYDIIINGIEIGKd-dDPILSFSEQKSLK 234 Lactococcus lact...
EGA90049    159 YVGKMPy-ETKVAVLGNGHTTKGVLRILhGLGADVDVYGRKLESLFVknMVNYDVLVNCVMWDTnrtDRIIYKEDLKRLK 237 Planococcus dong...
A5HZ59      157 NYGSIPtsETKVAILGSGNVSQGAFSAIsKFNPDIRMFYRKTMNQLKdeLEEFDIIINGIEMDNp-nKHILTLEDQMRLK 235 Clostridium botu...
EEG47467    146 CCGILPe-GKKAAVIGRGNTAQGAIRALvRGGAYVTVYGRKNEEKLRkdIGQYDIIVNAVLWDPkrtDHIISRKELRQAK 224 Blautia hydrogen...
BAK58718    156 KFGILPdeSTKIAVLGSGNVSQGAFHAIsKFSSNVKMFYRRTLPVFKetFSTYDIIVNGIEVGAg-nAPILSLEDQKQLK 234 Lactococcus garv...
Feature 1                                                                             
ADX67668    222 kGALIIDVSCDRNGGIETCIPTTMDNPTYEVDGIVHYAVDHTPSIFYKTISRSLSKEVAKTIDFLIEDNP 291 Weeksella virosa DSM 16922
NP_781075   223 nGALIIDISCDSNKAIETSISTTIQNPTYSIDGITHYVVDHTPSLFFKTATKSISKELTKYIDILVEEKE 292 Clostridium tetani E88
AEB30912    228 pGTLLIDVSCDEHGAIETTIPTTLEHPTYEINDVIHYAVDHTPTIFYRSSSSAISKETYKYIDDLVEGRP 297 Carnobacterium sp. 17-4
EET81503    222 kGSLIIDISCDRNGGVETSIPTTLTNPIYVVDNIVHYAVDHTPTLFFKTISESLSENIAPYLNQLIDDTP 291 Acinetobacter radioresiste...
ZP_09447531 225 kGALIIDVSCDRNGAIETSVPTTIEHPTYKVDGILHYVVDHTPSIFFKTFTLDNSEVIFPYIEQLMTGNI 294 Lactobacillus mali KCTC 3596
P15244      235 kGTLIIDVAADAGNTIEGSHFTSIDAPIYENAGKYYYVVPNTPSLIYRNVSQELSKILSENIFRKDCSRF 304 Lactococcus lactis subsp. ...
EGA90049    238 kGTMIIDVSCDPNMEIETSRPSTIDDPVYTVDGIIHYTVDNTPAMFPHTVTKVLSEGFSPMVDNFVEGNW 307 Planococcus donghaensis MP...
A5HZ59      236 kNCLIIDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIFYRQSSKAISEAFSKHVYSKELEFY 305 Clostridium botulinum A st...
EEG47467    225 qQALLVDVSCDEHGAVETSRPTDYAQPTFVEEGVIHYCVDHTPSIYYREASKFISSQVKRFIRPLVTGET 294 Blautia hydrogenotrophica ...
BAK58718    235 rGSFIIDTAADAGNTIEGNHFTTMKDSIYKEKGIYYYCVPNTPSMAYRNVSPMLSKQLSKYIFKENVGVF 304 Lactococcus garvieae Lg2

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